Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 OR10V3P-201ENST00000525712 725 ntBASIC4.23□□□□□ -1.73
PDX1P52945 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC4.23□□□□□ -1.73
PDX1P52945 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC4.23□□□□□ -1.73
PDX1P52945 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC4.23□□□□□ -1.73
PDX1P52945 MTND1P24-201ENST00000552175 861 ntBASIC4.23□□□□□ -1.73
PDX1P52945 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC4.23□□□□□ -1.73
PDX1P52945 RPL21P7-201ENST00000557463 483 ntBASIC4.23□□□□□ -1.73
PDX1P52945 NIFKP8-201ENST00000560500 874 ntBASIC4.23□□□□□ -1.73
PDX1P52945 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC4.23□□□□□ -1.73
PDX1P52945 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC4.23□□□□□ -1.73
PDX1P52945 HMGB2P1-201ENST00000591146 634 ntBASIC4.23□□□□□ -1.73
PDX1P52945 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC4.23□□□□□ -1.73
PDX1P52945 NTAN1P1-201ENST00000603150 646 ntBASIC4.23□□□□□ -1.73
PDX1P52945 BPIFA4P-203ENST00000603168 689 ntBASIC4.23□□□□□ -1.73
PDX1P52945 AC079587.1-201ENST00000603846 277 ntBASIC4.23□□□□□ -1.73
PDX1P52945 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.23□□□□□ -1.73
PDX1P52945 VN1R7P-201ENST00000619242 903 ntBASIC4.23□□□□□ -1.73
PDX1P52945 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.23□□□□□ -1.73
PDX1P52945 MIR8059-201ENST00000620427 81 ntBASIC4.23□□□□□ -1.73
PDX1P52945 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.23□□□□□ -1.73
PDX1P52945 AC017104.5-201ENST00000637647 639 ntBASIC4.23□□□□□ -1.73
PDX1P52945 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.23□□□□□ -1.73
PDX1P52945 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
PDX1P52945 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PDX1P52945 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PDX1P52945 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PDX1P52945 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
PDX1P52945 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
PDX1P52945 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.23□□□□□ -1.73
PDX1P52945 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
PDX1P52945 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PDX1P52945 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PDX1P52945 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
PDX1P52945 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC4.22□□□□□ -1.73
PDX1P52945 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PDX1P52945 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
PDX1P52945 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
PDX1P52945 RN7SKP224-201ENST00000364140 325 ntBASIC4.22□□□□□ -1.73
PDX1P52945 MIR3065-201ENST00000390137 79 ntBASIC4.22□□□□□ -1.73
PDX1P52945 Y_RNA.578-201ENST00000390903 88 ntBASIC4.22□□□□□ -1.73
PDX1P52945 SNORA11F-201ENST00000408237 128 ntBASIC4.22□□□□□ -1.73
PDX1P52945 RN7SKP199-201ENST00000410325 305 ntBASIC4.22□□□□□ -1.73
PDX1P52945 OR8G2P-201ENST00000412796 908 ntBASIC4.22□□□□□ -1.73
PDX1P52945 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC4.22□□□□□ -1.73
PDX1P52945 MTND4P3-201ENST00000417829 541 ntBASIC4.22□□□□□ -1.73
PDX1P52945 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PDX1P52945 MTCYBP15-201ENST00000433123 1127 ntBASIC4.22□□□□□ -1.73
PDX1P52945 BTF3P10-201ENST00000433415 495 ntBASIC4.22□□□□□ -1.73
PDX1P52945 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.22□□□□□ -1.73
PDX1P52945 AC234064.1-201ENST00000436312 247 ntBASIC4.22□□□□□ -1.73
PDX1P52945 AC092809.1-201ENST00000441469 474 ntBASIC4.22□□□□□ -1.73
PDX1P52945 MTND1P33-201ENST00000446251 917 ntBASIC4.22□□□□□ -1.73
PDX1P52945 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
PDX1P52945 AC012671.1-201ENST00000451912 203 ntBASIC4.22□□□□□ -1.73
PDX1P52945 MRPL35P4-201ENST00000453682 566 ntBASIC4.22□□□□□ -1.73
PDX1P52945 SNORA84-201ENST00000459229 133 ntBASIC4.22□□□□□ -1.73
PDX1P52945 RPS27AP17-201ENST00000463344 455 ntBASIC4.22□□□□□ -1.73
PDX1P52945 PRDX3P4-201ENST00000470828 747 ntBASIC4.22□□□□□ -1.73
PDX1P52945 RPL35P6-201ENST00000490024 372 ntBASIC4.22□□□□□ -1.73
PDX1P52945 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.22□□□□□ -1.73
PDX1P52945 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC4.22□□□□□ -1.73
PDX1P52945 IGHVIII-38-1-201ENST00000521454 282 ntBASIC4.22□□□□□ -1.73
PDX1P52945 MED28P5-201ENST00000528254 438 ntBASIC4.22□□□□□ -1.73
PDX1P52945 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC4.22□□□□□ -1.73
PDX1P52945 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.22□□□□□ -1.73
PDX1P52945 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC4.22□□□□□ -1.73
PDX1P52945 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC4.22□□□□□ -1.73
PDX1P52945 RN7SL600P-201ENST00000581811 299 ntBASIC4.22□□□□□ -1.73
PDX1P52945 AC006130.2-201ENST00000586202 326 ntBASIC4.22□□□□□ -1.73
PDX1P52945 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.22□□□□□ -1.73
PDX1P52945 AC090181.2-201ENST00000602975 672 ntBASIC4.22□□□□□ -1.73
PDX1P52945 AL137072.1-201ENST00000603444 466 ntBASIC4.22□□□□□ -1.73
PDX1P52945 MIR92B-201ENST00000607575 96 ntBASIC4.22□□□□□ -1.73
PDX1P52945 PDCD6IPP1-202ENST00000622242 1064 ntBASIC4.22□□□□□ -1.73
PDX1P52945 AC008785.1-201ENST00000624475 456 ntBASIC4.22□□□□□ -1.73
PDX1P52945 AC008993.2-201ENST00000631744 806 ntBASIC4.22□□□□□ -1.73
PDX1P52945 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PDX1P52945 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.22□□□□□ -1.73
PDX1P52945 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.22□□□□□ -1.73
PDX1P52945 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.22□□□□□ -1.73
PDX1P52945 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.22□□□□□ -1.73
PDX1P52945 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
PDX1P52945 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PDX1P52945 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC4.21□□□□□ -1.73
PDX1P52945 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.73
PDX1P52945 AL353743.4-201ENST00000422653 1547 ntBASIC4.21□□□□□ -1.73
PDX1P52945 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.21□□□□□ -1.73
PDX1P52945 IQCB2P-201ENST00000401788 1633 ntBASIC4.21□□□□□ -1.73
PDX1P52945 AC139769.1-204ENST00000472297 1931 ntBASIC4.21□□□□□ -1.74
PDX1P52945 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.21□□□□□ -1.74
PDX1P52945 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PDX1P52945 RNU1-20P-201ENST00000363314 162 ntBASIC4.21□□□□□ -1.74
PDX1P52945 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
PDX1P52945 AL359837.1-201ENST00000381357 287 ntBASIC4.21□□□□□ -1.74
PDX1P52945 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.21□□□□□ -1.74
PDX1P52945 FCF1P5-201ENST00000406490 482 ntBASIC4.21□□□□□ -1.74
PDX1P52945 VDAC1P9-201ENST00000412766 841 ntBASIC4.21□□□□□ -1.74
PDX1P52945 RPL6P29-201ENST00000414863 865 ntBASIC4.21□□□□□ -1.74
PDX1P52945 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.21□□□□□ -1.74
PDX1P52945 AL356095.1-201ENST00000417217 199 ntBASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms