Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 MAPK10-349ENST00000641767 3661 ntBASIC3.41□□□□□ -1.86
RIF1Q5UIP0 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
RIF1Q5UIP0 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
RIF1Q5UIP0 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
RIF1Q5UIP0 OR5J1P-201ENST00000313544 939 ntBASIC3.41□□□□□ -1.86
RIF1Q5UIP0 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC3.41□□□□□ -1.86
RIF1Q5UIP0 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC3.41□□□□□ -1.86
RIF1Q5UIP0 NECAP1P2-201ENST00000455668 727 ntBASIC3.41□□□□□ -1.86
RIF1Q5UIP0 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC3.41□□□□□ -1.86
RIF1Q5UIP0 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC3.41□□□□□ -1.86
RIF1Q5UIP0 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
RIF1Q5UIP0 AC091826.1-201ENST00000514065 313 ntBASIC3.41□□□□□ -1.86
RIF1Q5UIP0 AC090151.1-201ENST00000520784 730 ntBASIC3.41□□□□□ -1.86
RIF1Q5UIP0 ATP5F1P5-201ENST00000526403 760 ntBASIC3.41□□□□□ -1.86
RIF1Q5UIP0 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.41□□□□□ -1.86
RIF1Q5UIP0 AP000916.1-201ENST00000533869 835 ntBASIC3.41□□□□□ -1.86
RIF1Q5UIP0 AC022080.3-201ENST00000544433 482 ntBASIC3.41□□□□□ -1.86
RIF1Q5UIP0 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC3.41□□□□□ -1.86
RIF1Q5UIP0 AC067852.4-201ENST00000590314 478 ntBASIC3.41□□□□□ -1.86
RIF1Q5UIP0 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC3.41□□□□□ -1.86
RIF1Q5UIP0 AP003355.3-201ENST00000623465 114 ntBASIC3.41□□□□□ -1.86
RIF1Q5UIP0 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
RIF1Q5UIP0 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
RIF1Q5UIP0 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.41□□□□□ -1.86
RIF1Q5UIP0 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
RIF1Q5UIP0 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC3.41□□□□□ -1.86
RIF1Q5UIP0 YES1-203ENST00000577961 4554 ntTSL 5 BASIC3.41□□□□□ -1.86
RIF1Q5UIP0 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.41□□□□□ -1.86
RIF1Q5UIP0 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
RIF1Q5UIP0 TNPO1P3-201ENST00000436471 2662 ntBASIC3.41□□□□□ -1.86
RIF1Q5UIP0 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
RIF1Q5UIP0 Y_RNA.238-201ENST00000364441 102 ntBASIC3.41□□□□□ -1.86
RIF1Q5UIP0 SNORA7.4-201ENST00000384249 137 ntBASIC3.41□□□□□ -1.86
RIF1Q5UIP0 SNORA44-201ENST00000384584 132 ntBASIC3.41□□□□□ -1.86
RIF1Q5UIP0 SETP9-201ENST00000423837 832 ntBASIC3.41□□□□□ -1.86
RIF1Q5UIP0 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.41□□□□□ -1.86
RIF1Q5UIP0 SLC31A1P1-201ENST00000451221 567 ntBASIC3.41□□□□□ -1.86
RIF1Q5UIP0 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
RIF1Q5UIP0 AC008694.2-201ENST00000517591 306 ntBASIC3.41□□□□□ -1.86
RIF1Q5UIP0 AL121766.1-201ENST00000547436 487 ntBASIC3.41□□□□□ -1.86
RIF1Q5UIP0 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC3.41□□□□□ -1.86
RIF1Q5UIP0 DPPA3P2-201ENST00000553589 478 ntBASIC3.41□□□□□ -1.86
RIF1Q5UIP0 AC023389.2-201ENST00000580031 955 ntBASIC3.41□□□□□ -1.86
RIF1Q5UIP0 MIR4660-201ENST00000583549 74 ntBASIC3.41□□□□□ -1.86
RIF1Q5UIP0 AC006539.2-201ENST00000601729 572 ntBASIC3.41□□□□□ -1.86
RIF1Q5UIP0 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.41□□□□□ -1.86
RIF1Q5UIP0 AC015922.4-201ENST00000612568 690 ntBASIC3.41□□□□□ -1.86
RIF1Q5UIP0 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC3.41□□□□□ -1.86
RIF1Q5UIP0 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.4□□□□□ -1.86
RIF1Q5UIP0 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.86
RIF1Q5UIP0 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC3.4□□□□□ -1.86
RIF1Q5UIP0 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
RIF1Q5UIP0 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
RIF1Q5UIP0 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.4□□□□□ -1.87
RIF1Q5UIP0 AL357075.1-201ENST00000404107 726 ntBASIC3.4□□□□□ -1.87
RIF1Q5UIP0 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.4□□□□□ -1.87
RIF1Q5UIP0 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.4□□□□□ -1.87
RIF1Q5UIP0 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.4□□□□□ -1.87
RIF1Q5UIP0 RPL7P38-201ENST00000488396 739 ntBASIC3.4□□□□□ -1.87
RIF1Q5UIP0 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC3.4□□□□□ -1.87
RIF1Q5UIP0 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.4□□□□□ -1.87
RIF1Q5UIP0 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.4□□□□□ -1.87
RIF1Q5UIP0 OR51C1P-201ENST00000608504 942 ntBASIC3.4□□□□□ -1.87
RIF1Q5UIP0 AC009464.1-201ENST00000615731 469 ntBASIC3.4□□□□□ -1.87
RIF1Q5UIP0 AC139713.2-210ENST00000641741 992 ntBASIC3.4□□□□□ -1.87
RIF1Q5UIP0 AC005831.1-201ENST00000624384 1697 ntBASIC3.4□□□□□ -1.87
RIF1Q5UIP0 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
RIF1Q5UIP0 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
RIF1Q5UIP0 AC009313.2-201ENST00000417893 1941 ntBASIC3.4□□□□□ -1.87
RIF1Q5UIP0 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
RIF1Q5UIP0 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.4□□□□□ -1.87
RIF1Q5UIP0 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
RIF1Q5UIP0 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC3.4□□□□□ -1.87
RIF1Q5UIP0 AL645937.1-201ENST00000641739 1652 ntBASIC3.4□□□□□ -1.87
RIF1Q5UIP0 ASNSP3-201ENST00000451989 1306 ntBASIC3.4□□□□□ -1.87
RIF1Q5UIP0 RNU1-18P-201ENST00000363062 164 ntBASIC3.39□□□□□ -1.87
RIF1Q5UIP0 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.39□□□□□ -1.87
RIF1Q5UIP0 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC3.39□□□□□ -1.87
RIF1Q5UIP0 VN1R48P-201ENST00000448149 1036 ntBASIC3.39□□□□□ -1.87
RIF1Q5UIP0 PSMC1P13-201ENST00000458195 985 ntBASIC3.39□□□□□ -1.87
RIF1Q5UIP0 AC108751.2-201ENST00000469993 231 ntBASIC3.39□□□□□ -1.87
RIF1Q5UIP0 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.39□□□□□ -1.87
RIF1Q5UIP0 RPL7P47-201ENST00000497299 556 ntBASIC3.39□□□□□ -1.87
RIF1Q5UIP0 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC3.39□□□□□ -1.87
RIF1Q5UIP0 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.39□□□□□ -1.87
RIF1Q5UIP0 AC009097.3-201ENST00000563557 1018 ntBASIC3.39□□□□□ -1.87
RIF1Q5UIP0 AC090312.2-201ENST00000582687 378 ntBASIC3.39□□□□□ -1.87
RIF1Q5UIP0 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC3.39□□□□□ -1.87
RIF1Q5UIP0 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC3.39□□□□□ -1.87
RIF1Q5UIP0 SMCR2_2.1-201ENST00000619783 161 ntBASIC3.39□□□□□ -1.87
RIF1Q5UIP0 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.39□□□□□ -1.87
RIF1Q5UIP0 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
RIF1Q5UIP0 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.39□□□□□ -1.87
RIF1Q5UIP0 TRBV12-1-201ENST00000479785 344 ntBASIC3.39□□□□□ -1.87
RIF1Q5UIP0 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.39□□□□□ -1.87
RIF1Q5UIP0 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.39□□□□□ -1.87
RIF1Q5UIP0 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
RIF1Q5UIP0 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.39□□□□□ -1.87
RIF1Q5UIP0 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.39□□□□□ -1.87
RIF1Q5UIP0 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 127.3 ms