Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC6.75□□□□□ -1.33
RFX1P22670 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC6.75□□□□□ -1.33
RFX1P22670 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC6.75□□□□□ -1.33
RFX1P22670 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC6.75□□□□□ -1.33
RFX1P22670 AC008055.1-201ENST00000547032 609 ntBASIC6.75□□□□□ -1.33
RFX1P22670 ARL2BPP2-201ENST00000550907 489 ntBASIC6.75□□□□□ -1.33
RFX1P22670 AC007494.1-201ENST00000562293 760 ntBASIC6.75□□□□□ -1.33
RFX1P22670 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
RFX1P22670 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC6.75□□□□□ -1.33
RFX1P22670 MIR3614-201ENST00000581261 86 ntBASIC6.75□□□□□ -1.33
RFX1P22670 AC008507.3-201ENST00000585753 472 ntBASIC6.75□□□□□ -1.33
RFX1P22670 NPIPB1P-202ENST00000588786 828 ntBASIC6.75□□□□□ -1.33
RFX1P22670 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC6.75□□□□□ -1.33
RFX1P22670 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC6.75□□□□□ -1.33
RFX1P22670 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC6.75□□□□□ -1.33
RFX1P22670 AL355472.4-201ENST00000610233 626 ntBASIC6.75□□□□□ -1.33
RFX1P22670 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC6.75□□□□□ -1.33
RFX1P22670 MIR6768-201ENST00000610734 72 ntBASIC6.75□□□□□ -1.33
RFX1P22670 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC6.75□□□□□ -1.33
RFX1P22670 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC6.75□□□□□ -1.33
RFX1P22670 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC6.75□□□□□ -1.33
RFX1P22670 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
RFX1P22670 GNL2P1-201ENST00000451274 2190 ntBASIC6.75□□□□□ -1.33
RFX1P22670 AKAP17BP-201ENST00000431706 2719 ntBASIC6.75□□□□□ -1.33
RFX1P22670 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
RFX1P22670 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
RFX1P22670 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
RFX1P22670 ZNF652P1-201ENST00000442420 1309 ntBASIC6.75□□□□□ -1.33
RFX1P22670 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC6.75□□□□□ -1.33
RFX1P22670 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
RFX1P22670 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
RFX1P22670 AC006026.1-201ENST00000444025 1803 ntBASIC6.74□□□□□ -1.33
RFX1P22670 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC6.74□□□□□ -1.33
RFX1P22670 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC6.74□□□□□ -1.33
RFX1P22670 RNU6-451P-201ENST00000362921 107 ntBASIC6.74□□□□□ -1.33
RFX1P22670 RNU4-73P-201ENST00000363164 141 ntBASIC6.74□□□□□ -1.33
RFX1P22670 Y_RNA.142-201ENST00000363491 102 ntBASIC6.74□□□□□ -1.33
RFX1P22670 RNU6-169P-201ENST00000365336 107 ntBASIC6.74□□□□□ -1.33
RFX1P22670 RNU6-359P-201ENST00000365466 108 ntBASIC6.74□□□□□ -1.33
RFX1P22670 Y_RNA.529-201ENST00000384586 119 ntBASIC6.74□□□□□ -1.33
RFX1P22670 AL031985.1-201ENST00000392713 418 ntBASIC6.74□□□□□ -1.33
RFX1P22670 RNA5SP178-201ENST00000410380 128 ntBASIC6.74□□□□□ -1.33
RFX1P22670 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC6.74□□□□□ -1.33
RFX1P22670 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC6.74□□□□□ -1.33
RFX1P22670 AC015977.1-201ENST00000418887 292 ntBASIC6.74□□□□□ -1.33
RFX1P22670 AC019097.1-201ENST00000424783 735 ntBASIC6.74□□□□□ -1.33
RFX1P22670 AC016027.5-201ENST00000427227 210 ntBASIC6.74□□□□□ -1.33
RFX1P22670 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
RFX1P22670 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC6.74□□□□□ -1.33
RFX1P22670 OR52B5P-201ENST00000435337 951 ntBASIC6.74□□□□□ -1.33
RFX1P22670 AL118496.2-201ENST00000448300 230 ntBASIC6.74□□□□□ -1.33
RFX1P22670 ACA64.1-201ENST00000459171 127 ntBASIC6.74□□□□□ -1.33
RFX1P22670 AP001992.1-205ENST00000462248 379 ntBASIC6.74□□□□□ -1.33
RFX1P22670 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC6.74□□□□□ -1.33
RFX1P22670 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC6.74□□□□□ -1.33
RFX1P22670 AL035690.1-201ENST00000490892 383 ntBASIC6.74□□□□□ -1.33
RFX1P22670 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC6.74□□□□□ -1.33
RFX1P22670 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC6.74□□□□□ -1.33
RFX1P22670 AC111000.3-201ENST00000508057 576 ntBASIC6.74□□□□□ -1.33
RFX1P22670 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC6.74□□□□□ -1.33
RFX1P22670 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC6.74□□□□□ -1.33
RFX1P22670 AC107934.1-201ENST00000522215 217 ntBASIC6.74□□□□□ -1.33
RFX1P22670 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC6.74□□□□□ -1.33
RFX1P22670 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC6.74□□□□□ -1.33
RFX1P22670 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC6.74□□□□□ -1.33
RFX1P22670 BRD9P1-201ENST00000529855 560 ntBASIC6.74□□□□□ -1.33
RFX1P22670 AC022832.1-201ENST00000530718 645 ntBASIC6.74□□□□□ -1.33
RFX1P22670 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC6.74□□□□□ -1.33
RFX1P22670 AC090615.1-201ENST00000577519 154 ntBASIC6.74□□□□□ -1.33
RFX1P22670 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC6.74□□□□□ -1.33
RFX1P22670 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC6.74□□□□□ -1.33
RFX1P22670 AL136363.1-201ENST00000605349 337 ntBASIC6.74□□□□□ -1.33
RFX1P22670 AC064836.2-201ENST00000609491 462 ntBASIC6.74□□□□□ -1.33
RFX1P22670 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC6.74□□□□□ -1.33
RFX1P22670 FAM27E2-201ENST00000619668 403 ntBASIC6.74□□□□□ -1.33
RFX1P22670 MIR6886-201ENST00000619864 61 ntBASIC6.74□□□□□ -1.33
RFX1P22670 AP002505.2-201ENST00000623585 696 ntBASIC6.74□□□□□ -1.33
RFX1P22670 SRP54-214ENST00000630962 162 ntTSL 5 BASIC6.74□□□□□ -1.33
RFX1P22670 AC112487.2-201ENST00000637950 304 ntBASIC6.74□□□□□ -1.33
RFX1P22670 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
RFX1P22670 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
RFX1P22670 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
RFX1P22670 AL359976.1-201ENST00000418655 3528 ntBASIC6.74□□□□□ -1.33
RFX1P22670 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
RFX1P22670 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
RFX1P22670 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC6.74□□□□□ -1.33
RFX1P22670 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC6.74□□□□□ -1.33
RFX1P22670 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC6.74□□□□□ -1.33
RFX1P22670 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC6.73□□□□□ -1.33
RFX1P22670 PARP4P2-201ENST00000446672 3326 ntBASIC6.73□□□□□ -1.33
RFX1P22670 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
RFX1P22670 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
RFX1P22670 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
RFX1P22670 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
RFX1P22670 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC6.73□□□□□ -1.33
RFX1P22670 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
RFX1P22670 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
RFX1P22670 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC6.73□□□□□ -1.33
RFX1P22670 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
RFX1P22670 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 128.2 ms