Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 AC110792.1-201ENST00000491826 472 ntBASIC4.17□□□□□ -1.74
TPM1P09493 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC4.17□□□□□ -1.74
TPM1P09493 RPL30P11-201ENST00000495304 339 ntBASIC4.17□□□□□ -1.74
TPM1P09493 AC108941.1-201ENST00000502853 530 ntBASIC4.17□□□□□ -1.74
TPM1P09493 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.17□□□□□ -1.74
TPM1P09493 HIGD1AP18-201ENST00000520730 278 ntBASIC4.17□□□□□ -1.74
TPM1P09493 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC4.17□□□□□ -1.74
TPM1P09493 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC4.17□□□□□ -1.74
TPM1P09493 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC4.17□□□□□ -1.74
TPM1P09493 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC4.17□□□□□ -1.74
TPM1P09493 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC4.17□□□□□ -1.74
TPM1P09493 AL592436.1-201ENST00000605135 558 ntBASIC4.17□□□□□ -1.74
TPM1P09493 MIR7703-201ENST00000620784 77 ntBASIC4.17□□□□□ -1.74
TPM1P09493 AC007342.8-201ENST00000623278 678 ntBASIC4.17□□□□□ -1.74
TPM1P09493 AC019080.5-201ENST00000624891 757 ntBASIC4.17□□□□□ -1.74
TPM1P09493 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
TPM1P09493 CASC19-261ENST00000641853 1638 ntBASIC4.17□□□□□ -1.74
TPM1P09493 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
TPM1P09493 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
TPM1P09493 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.16□□□□□ -1.74
TPM1P09493 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC4.16□□□□□ -1.74
TPM1P09493 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
TPM1P09493 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC4.16□□□□□ -1.74
TPM1P09493 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.16□□□□□ -1.74
TPM1P09493 AL590704.1-201ENST00000402856 794 ntBASIC4.16□□□□□ -1.74
TPM1P09493 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC4.16□□□□□ -1.74
TPM1P09493 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC4.16□□□□□ -1.74
TPM1P09493 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC4.16□□□□□ -1.74
TPM1P09493 Z97055.1-201ENST00000419730 712 ntBASIC4.16□□□□□ -1.74
TPM1P09493 COX6CP15-201ENST00000426313 211 ntBASIC4.16□□□□□ -1.74
TPM1P09493 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC4.16□□□□□ -1.74
TPM1P09493 TXNP1-201ENST00000441872 371 ntBASIC4.16□□□□□ -1.74
TPM1P09493 MTCYBP21-201ENST00000443300 1113 ntBASIC4.16□□□□□ -1.74
TPM1P09493 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC4.16□□□□□ -1.74
TPM1P09493 CYCSP20-201ENST00000473154 315 ntBASIC4.16□□□□□ -1.74
TPM1P09493 AP000893.1-201ENST00000474462 794 ntBASIC4.16□□□□□ -1.74
TPM1P09493 AC105137.1-201ENST00000484355 562 ntBASIC4.16□□□□□ -1.74
TPM1P09493 FTH1P24-201ENST00000503502 462 ntBASIC4.16□□□□□ -1.74
TPM1P09493 RNA5SP164-201ENST00000516533 110 ntBASIC4.16□□□□□ -1.74
TPM1P09493 AC022616.2-201ENST00000523185 300 ntBASIC4.16□□□□□ -1.74
TPM1P09493 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC4.16□□□□□ -1.74
TPM1P09493 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC4.16□□□□□ -1.74
TPM1P09493 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.16□□□□□ -1.74
TPM1P09493 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC4.16□□□□□ -1.74
TPM1P09493 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
TPM1P09493 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC4.16□□□□□ -1.74
TPM1P09493 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
TPM1P09493 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.15□□□□□ -1.75
TPM1P09493 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
TPM1P09493 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC4.15□□□□□ -1.75
TPM1P09493 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.15□□□□□ -1.75
TPM1P09493 RNU6-244P-201ENST00000391028 104 ntBASIC4.15□□□□□ -1.75
TPM1P09493 ST13P16-201ENST00000401760 781 ntBASIC4.15□□□□□ -1.75
TPM1P09493 AC004022.2-201ENST00000413824 193 ntBASIC4.15□□□□□ -1.75
TPM1P09493 LIPT1P1-201ENST00000415870 1186 ntBASIC4.15□□□□□ -1.75
TPM1P09493 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.15□□□□□ -1.75
TPM1P09493 PTP4A1P5-201ENST00000420305 455 ntBASIC4.15□□□□□ -1.75
TPM1P09493 RPL31P12-201ENST00000422587 358 ntBASIC4.15□□□□□ -1.75
TPM1P09493 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.15□□□□□ -1.75
TPM1P09493 AL157827.1-201ENST00000447622 132 ntBASIC4.15□□□□□ -1.75
TPM1P09493 AC006480.1-201ENST00000449887 378 ntBASIC4.15□□□□□ -1.75
TPM1P09493 TPMTP4-201ENST00000450749 678 ntBASIC4.15□□□□□ -1.75
TPM1P09493 AC006539.3-201ENST00000454258 129 ntBASIC4.15□□□□□ -1.75
TPM1P09493 TVP23BP2-201ENST00000455082 615 ntBASIC4.15□□□□□ -1.75
TPM1P09493 HMGN2P7-201ENST00000456186 273 ntBASIC4.15□□□□□ -1.75
TPM1P09493 RPL9P32-201ENST00000464118 620 ntBASIC4.15□□□□□ -1.75
TPM1P09493 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.15□□□□□ -1.75
TPM1P09493 AC025674.1-201ENST00000507074 324 ntBASIC4.15□□□□□ -1.75
TPM1P09493 AC021146.7-201ENST00000509604 775 ntBASIC4.15□□□□□ -1.75
TPM1P09493 RNU6-1308P-201ENST00000516817 103 ntBASIC4.15□□□□□ -1.75
TPM1P09493 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC4.15□□□□□ -1.75
TPM1P09493 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC4.15□□□□□ -1.75
TPM1P09493 AC006270.2-201ENST00000578523 652 ntBASIC4.15□□□□□ -1.75
TPM1P09493 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC4.15□□□□□ -1.75
TPM1P09493 NPM1P45-201ENST00000583151 559 ntBASIC4.15□□□□□ -1.75
TPM1P09493 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC4.15□□□□□ -1.75
TPM1P09493 KLKP1-201ENST00000595979 403 ntBASIC4.15□□□□□ -1.75
TPM1P09493 AL163642.2-201ENST00000604722 1019 ntBASIC4.15□□□□□ -1.75
TPM1P09493 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.15□□□□□ -1.75
TPM1P09493 NF1P10-201ENST00000613227 742 ntBASIC4.15□□□□□ -1.75
TPM1P09493 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.15□□□□□ -1.75
TPM1P09493 AC015726.3-201ENST00000624501 418 ntBASIC4.15□□□□□ -1.75
TPM1P09493 METTL8-218ENST00000638989 876 ntTSL 5 BASIC4.15□□□□□ -1.75
TPM1P09493 METTL8-219ENST00000640734 726 ntTSL 2 BASIC4.15□□□□□ -1.75
TPM1P09493 AC012618.3-205ENST00000637896 1496 ntBASIC4.15□□□□□ -1.75
TPM1P09493 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.15□□□□□ -1.75
TPM1P09493 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
TPM1P09493 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.14□□□□□ -1.75
TPM1P09493 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC4.14□□□□□ -1.75
TPM1P09493 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC4.14□□□□□ -1.75
TPM1P09493 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
TPM1P09493 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
TPM1P09493 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
TPM1P09493 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
TPM1P09493 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC4.14□□□□□ -1.75
TPM1P09493 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC4.14□□□□□ -1.75
TPM1P09493 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
TPM1P09493 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC4.14□□□□□ -1.75
TPM1P09493 AC007394.1-201ENST00000421941 531 ntBASIC4.14□□□□□ -1.75
TPM1P09493 AC009480.2-201ENST00000422916 432 ntBASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms