Protein–RNA interactions for Protein: O00287

RFXAP, Regulatory factor X-associated protein, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFXAPO00287 AC104964.3-201ENST00000606115 2860 ntBASIC5.66□□□□□ -1.5
RFXAPO00287 DCAF13P3-201ENST00000561147 1334 ntBASIC5.66□□□□□ -1.5
RFXAPO00287 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RFXAPO00287 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RFXAPO00287 LINC01720-201ENST00000413356 2216 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RFXAPO00287 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RFXAPO00287 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RFXAPO00287 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.65□□□□□ -1.5
RFXAPO00287 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
RFXAPO00287 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC5.65□□□□□ -1.5
RFXAPO00287 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.65□□□□□ -1.5
RFXAPO00287 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC5.65□□□□□ -1.5
RFXAPO00287 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
RFXAPO00287 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
RFXAPO00287 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.65□□□□□ -1.5
RFXAPO00287 Z99496.1-201ENST00000469424 1477 ntBASIC5.65□□□□□ -1.5
RFXAPO00287 AC083837.1-201ENST00000565297 2994 ntBASIC5.65□□□□□ -1.5
RFXAPO00287 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.65□□□□□ -1.5
RFXAPO00287 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
RFXAPO00287 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.65□□□□□ -1.5
RFXAPO00287 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
RFXAPO00287 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
RFXAPO00287 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
RFXAPO00287 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC5.65□□□□□ -1.5
RFXAPO00287 SNORA70.2-201ENST00000364506 135 ntBASIC5.65□□□□□ -1.5
RFXAPO00287 Y_RNA.311-201ENST00000365068 96 ntBASIC5.65□□□□□ -1.5
RFXAPO00287 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
RFXAPO00287 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.5
RFXAPO00287 SNORD65.1-201ENST00000390889 71 ntBASIC5.65□□□□□ -1.5
RFXAPO00287 MTCO3P40-201ENST00000392516 676 ntBASIC5.65□□□□□ -1.5
RFXAPO00287 RPL10P10-201ENST00000403509 664 ntBASIC5.65□□□□□ -1.5
RFXAPO00287 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
RFXAPO00287 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC5.65□□□□□ -1.5
RFXAPO00287 RPS3AP9-201ENST00000417027 792 ntBASIC5.65□□□□□ -1.5
RFXAPO00287 RPL17P36-201ENST00000420302 549 ntBASIC5.65□□□□□ -1.5
RFXAPO00287 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC5.65□□□□□ -1.5
RFXAPO00287 EI24P4-201ENST00000423683 1078 ntBASIC5.65□□□□□ -1.5
RFXAPO00287 CRIP1P1-201ENST00000427567 185 ntBASIC5.65□□□□□ -1.5
RFXAPO00287 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.65□□□□□ -1.5
RFXAPO00287 AL451074.3-201ENST00000437709 472 ntBASIC5.65□□□□□ -1.5
RFXAPO00287 REG1CP-206ENST00000447469 496 ntBASIC5.65□□□□□ -1.5
RFXAPO00287 AL035407.2-201ENST00000454090 378 ntBASIC5.65□□□□□ -1.5
RFXAPO00287 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.65□□□□□ -1.5
RFXAPO00287 AC058823.1-201ENST00000485315 474 ntBASIC5.65□□□□□ -1.5
RFXAPO00287 LRRC34P2-201ENST00000514850 553 ntBASIC5.65□□□□□ -1.5
RFXAPO00287 MTCO1P30-201ENST00000515244 580 ntBASIC5.65□□□□□ -1.5
RFXAPO00287 RNU6-327P-201ENST00000516270 127 ntBASIC5.65□□□□□ -1.5
RFXAPO00287 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC5.65□□□□□ -1.5
RFXAPO00287 OR4C2P-201ENST00000530855 1064 ntBASIC5.65□□□□□ -1.5
RFXAPO00287 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC5.65□□□□□ -1.5
RFXAPO00287 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
RFXAPO00287 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC5.65□□□□□ -1.5
RFXAPO00287 H3F3BP2-201ENST00000583907 357 ntBASIC5.65□□□□□ -1.5
RFXAPO00287 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC5.65□□□□□ -1.5
RFXAPO00287 AC005962.2-201ENST00000611427 652 ntBASIC5.65□□□□□ -1.5
RFXAPO00287 AL359880.1-201ENST00000621879 266 ntBASIC5.65□□□□□ -1.5
RFXAPO00287 AC090574.1-201ENST00000623186 233 ntBASIC5.65□□□□□ -1.5
RFXAPO00287 AP003122.6-201ENST00000623831 495 ntBASIC5.65□□□□□ -1.5
RFXAPO00287 SELE-204ENST00000367776 3576 ntTSL 5 BASIC5.65□□□□□ -1.51
RFXAPO00287 SELE-205ENST00000367777 3576 ntTSL 5 BASIC5.65□□□□□ -1.51
RFXAPO00287 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC5.65□□□□□ -1.51
RFXAPO00287 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC5.65□□□□□ -1.51
RFXAPO00287 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC5.65□□□□□ -1.51
RFXAPO00287 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
RFXAPO00287 OR4G11P-202ENST00000642116 1414 ntBASIC5.65□□□□□ -1.51
RFXAPO00287 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
RFXAPO00287 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
RFXAPO00287 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
RFXAPO00287 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC5.64□□□□□ -1.51
RFXAPO00287 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC5.64□□□□□ -1.51
RFXAPO00287 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
RFXAPO00287 RNU5F-6P-201ENST00000362979 116 ntBASIC5.64□□□□□ -1.51
RFXAPO00287 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC5.64□□□□□ -1.51
RFXAPO00287 MIR142-201ENST00000384835 87 ntBASIC5.64□□□□□ -1.51
RFXAPO00287 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC5.64□□□□□ -1.51
RFXAPO00287 AIMP1P1-201ENST00000418670 937 ntBASIC5.64□□□□□ -1.51
RFXAPO00287 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC5.64□□□□□ -1.51
RFXAPO00287 OFD1P12Y-201ENST00000427963 1207 ntBASIC5.64□□□□□ -1.51
RFXAPO00287 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.64□□□□□ -1.51
RFXAPO00287 AC005534.2-201ENST00000431047 433 ntBASIC5.64□□□□□ -1.51
RFXAPO00287 TMEM183AP1-205ENST00000432739 290 ntBASIC5.64□□□□□ -1.51
RFXAPO00287 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC5.64□□□□□ -1.51
RFXAPO00287 USP9YP15-201ENST00000442391 422 ntBASIC5.64□□□□□ -1.51
RFXAPO00287 RPL34P20-201ENST00000442771 351 ntBASIC5.64□□□□□ -1.51
RFXAPO00287 AC112498.1-201ENST00000444401 332 ntBASIC5.64□□□□□ -1.51
RFXAPO00287 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC5.64□□□□□ -1.51
RFXAPO00287 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC5.64□□□□□ -1.51
RFXAPO00287 SNORD42A-201ENST00000459584 64 ntBASIC5.64□□□□□ -1.51
RFXAPO00287 AC092754.1-201ENST00000472975 479 ntBASIC5.64□□□□□ -1.51
RFXAPO00287 RPS29P25-201ENST00000481709 171 ntBASIC5.64□□□□□ -1.51
RFXAPO00287 SRP72-202ENST00000504757 745 ntTSL 2 BASIC5.64□□□□□ -1.51
RFXAPO00287 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC5.64□□□□□ -1.51
RFXAPO00287 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC5.64□□□□□ -1.51
RFXAPO00287 AC009646.1-201ENST00000510455 318 ntBASIC5.64□□□□□ -1.51
RFXAPO00287 RNU6-430P-201ENST00000517078 107 ntBASIC5.64□□□□□ -1.51
RFXAPO00287 AC134698.5-201ENST00000519444 336 ntBASIC5.64□□□□□ -1.51
RFXAPO00287 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC5.64□□□□□ -1.51
RFXAPO00287 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC5.64□□□□□ -1.51
RFXAPO00287 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC5.64□□□□□ -1.51
RFXAPO00287 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 168.2 ms