Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 PTS-202ENST00000524931 696 ntTSL 3 BASIC7.7□□□□□ -1.18
SHROOM4Q9ULL8 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC7.7□□□□□ -1.18
SHROOM4Q9ULL8 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC7.7□□□□□ -1.18
SHROOM4Q9ULL8 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC7.7□□□□□ -1.18
SHROOM4Q9ULL8 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC7.7□□□□□ -1.18
SHROOM4Q9ULL8 EIF4A2P1-201ENST00000587313 1063 ntBASIC7.7□□□□□ -1.18
SHROOM4Q9ULL8 ZNF92P3-201ENST00000596594 954 ntBASIC7.7□□□□□ -1.18
SHROOM4Q9ULL8 AL031985.2-201ENST00000600955 480 ntBASIC7.7□□□□□ -1.18
SHROOM4Q9ULL8 ELOCP34-201ENST00000604436 327 ntBASIC7.7□□□□□ -1.18
SHROOM4Q9ULL8 AC139769.3-201ENST00000618383 175 ntBASIC7.7□□□□□ -1.18
SHROOM4Q9ULL8 AC083865.1-201ENST00000636634 831 ntBASIC7.7□□□□□ -1.18
SHROOM4Q9ULL8 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC7.7□□□□□ -1.18
SHROOM4Q9ULL8 AC010329.2-201ENST00000595195 2737 ntBASIC7.7□□□□□ -1.18
SHROOM4Q9ULL8 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC7.7□□□□□ -1.18
SHROOM4Q9ULL8 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC7.7□□□□□ -1.18
SHROOM4Q9ULL8 SNORA60-201ENST00000362396 134 ntBASIC7.69□□□□□ -1.18
SHROOM4Q9ULL8 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
SHROOM4Q9ULL8 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
SHROOM4Q9ULL8 AL450992.3-201ENST00000413192 568 ntBASIC7.69□□□□□ -1.18
SHROOM4Q9ULL8 RPS7P15-201ENST00000415804 584 ntBASIC7.69□□□□□ -1.18
SHROOM4Q9ULL8 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC7.69□□□□□ -1.18
SHROOM4Q9ULL8 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC7.69□□□□□ -1.18
SHROOM4Q9ULL8 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC7.69□□□□□ -1.18
SHROOM4Q9ULL8 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC7.69□□□□□ -1.18
SHROOM4Q9ULL8 AC005776.1-201ENST00000603164 290 ntBASIC7.69□□□□□ -1.18
SHROOM4Q9ULL8 MIR7973-1-201ENST00000614683 76 ntBASIC7.69□□□□□ -1.18
SHROOM4Q9ULL8 AP001002.2-201ENST00000625137 386 ntBASIC7.69□□□□□ -1.18
SHROOM4Q9ULL8 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
SHROOM4Q9ULL8 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC7.69□□□□□ -1.18
SHROOM4Q9ULL8 MTCO1P4-201ENST00000520516 1409 ntBASIC7.69□□□□□ -1.18
SHROOM4Q9ULL8 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC7.69□□□□□ -1.18
SHROOM4Q9ULL8 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC7.69□□□□□ -1.18
SHROOM4Q9ULL8 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
SHROOM4Q9ULL8 BNIP3P41-201ENST00000503774 571 ntBASIC7.68□□□□□ -1.18
SHROOM4Q9ULL8 AC010627.1-201ENST00000503819 1294 ntBASIC7.68□□□□□ -1.18
SHROOM4Q9ULL8 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC7.68□□□□□ -1.18
SHROOM4Q9ULL8 IGLV3-26-201ENST00000520756 302 ntBASIC7.68□□□□□ -1.18
SHROOM4Q9ULL8 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC7.68□□□□□ -1.18
SHROOM4Q9ULL8 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC7.68□□□□□ -1.18
SHROOM4Q9ULL8 AC090079.2-201ENST00000575289 768 ntBASIC7.68□□□□□ -1.18
SHROOM4Q9ULL8 AC123786.2-201ENST00000603459 275 ntBASIC7.68□□□□□ -1.18
SHROOM4Q9ULL8 AC002069.2-201ENST00000603580 883 ntBASIC7.68□□□□□ -1.18
SHROOM4Q9ULL8 AP000542.2-201ENST00000623199 6179 ntBASIC7.68□□□□□ -1.18
SHROOM4Q9ULL8 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
SHROOM4Q9ULL8 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
SHROOM4Q9ULL8 ERCC6-202ENST00000374127 1782 ntBASIC7.68□□□□□ -1.18
SHROOM4Q9ULL8 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC7.68□□□□□ -1.18
SHROOM4Q9ULL8 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
SHROOM4Q9ULL8 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC7.68□□□□□ -1.18
SHROOM4Q9ULL8 AC093849.1-201ENST00000563631 2209 ntBASIC7.68□□□□□ -1.18
SHROOM4Q9ULL8 METTL21EP-201ENST00000298105 713 ntBASIC7.68□□□□□ -1.18
SHROOM4Q9ULL8 ATP5F1P6-201ENST00000402768 767 ntBASIC7.68□□□□□ -1.18
SHROOM4Q9ULL8 AL590290.1-201ENST00000405336 380 ntBASIC7.68□□□□□ -1.18
SHROOM4Q9ULL8 AC018635.1-201ENST00000468292 1030 ntBASIC7.68□□□□□ -1.18
SHROOM4Q9ULL8 AC104687.1-201ENST00000485829 412 ntBASIC7.68□□□□□ -1.18
SHROOM4Q9ULL8 DEFB109F-201ENST00000491870 277 ntBASIC7.68□□□□□ -1.18
SHROOM4Q9ULL8 UBE2CP3-201ENST00000502715 450 ntBASIC7.68□□□□□ -1.18
SHROOM4Q9ULL8 MTCO2P9-201ENST00000503214 694 ntBASIC7.68□□□□□ -1.18
SHROOM4Q9ULL8 AC133963.2-201ENST00000513686 578 ntBASIC7.68□□□□□ -1.18
SHROOM4Q9ULL8 RFESD-208ENST00000513950 464 ntTSL 5 BASIC7.68□□□□□ -1.18
SHROOM4Q9ULL8 AP002812.4-201ENST00000532139 286 ntBASIC7.68□□□□□ -1.18
SHROOM4Q9ULL8 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC7.68□□□□□ -1.18
SHROOM4Q9ULL8 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC7.68□□□□□ -1.18
SHROOM4Q9ULL8 AC120053.1-201ENST00000607706 736 ntBASIC7.68□□□□□ -1.18
SHROOM4Q9ULL8 AC092354.2-201ENST00000607786 514 ntBASIC7.68□□□□□ -1.18
SHROOM4Q9ULL8 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
SHROOM4Q9ULL8 AC016957.2-201ENST00000616998 848 ntBASIC7.68□□□□□ -1.18
SHROOM4Q9ULL8 AP002371.2-201ENST00000624450 503 ntBASIC7.68□□□□□ -1.18
SHROOM4Q9ULL8 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
SHROOM4Q9ULL8 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC7.67□□□□□ -1.18
SHROOM4Q9ULL8 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
SHROOM4Q9ULL8 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC7.67□□□□□ -1.18
SHROOM4Q9ULL8 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
SHROOM4Q9ULL8 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
SHROOM4Q9ULL8 LINC01347-201ENST00000417964 355 ntBASIC7.67□□□□□ -1.18
SHROOM4Q9ULL8 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
SHROOM4Q9ULL8 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC7.67□□□□□ -1.18
SHROOM4Q9ULL8 UBE2V1P6-201ENST00000430840 422 ntBASIC7.67□□□□□ -1.18
SHROOM4Q9ULL8 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC7.67□□□□□ -1.18
SHROOM4Q9ULL8 AC092013.1-201ENST00000438795 332 ntBASIC7.67□□□□□ -1.18
SHROOM4Q9ULL8 MED6P1-201ENST00000439659 713 ntBASIC7.67□□□□□ -1.18
SHROOM4Q9ULL8 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
SHROOM4Q9ULL8 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC7.67□□□□□ -1.18
SHROOM4Q9ULL8 AC115115.1-201ENST00000449927 248 ntBASIC7.67□□□□□ -1.18
SHROOM4Q9ULL8 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
SHROOM4Q9ULL8 AC108022.1-201ENST00000493466 478 ntBASIC7.67□□□□□ -1.18
SHROOM4Q9ULL8 IGKV1OR2-1-201ENST00000514060 354 ntBASIC7.67□□□□□ -1.18
SHROOM4Q9ULL8 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC7.67□□□□□ -1.18
SHROOM4Q9ULL8 RNU6-347P-201ENST00000516658 105 ntBASIC7.67□□□□□ -1.18
SHROOM4Q9ULL8 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC7.67□□□□□ -1.18
SHROOM4Q9ULL8 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC7.67□□□□□ -1.18
SHROOM4Q9ULL8 AC025260.1-201ENST00000548858 430 ntBASIC7.67□□□□□ -1.18
SHROOM4Q9ULL8 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC7.67□□□□□ -1.18
SHROOM4Q9ULL8 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
SHROOM4Q9ULL8 AC023509.5-201ENST00000617434 807 ntBASIC7.67□□□□□ -1.18
SHROOM4Q9ULL8 AL163051.2-201ENST00000618976 735 ntBASIC7.67□□□□□ -1.18
SHROOM4Q9ULL8 AC006249.1-201ENST00000621223 471 ntBASIC7.67□□□□□ -1.18
SHROOM4Q9ULL8 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
SHROOM4Q9ULL8 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
SHROOM4Q9ULL8 AC107027.3-201ENST00000565095 3473 ntBASIC7.66□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms