Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.27□□□□□ -1.73
SHFQ7M4L6 OR8B1P-202ENST00000641132 1178 ntBASIC4.27□□□□□ -1.73
SHFQ7M4L6 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.27□□□□□ -1.73
SHFQ7M4L6 AL136164.3-201ENST00000624429 3978 ntBASIC4.27□□□□□ -1.73
SHFQ7M4L6 PABPC1P6-201ENST00000445594 1829 ntBASIC4.27□□□□□ -1.73
SHFQ7M4L6 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.27□□□□□ -1.73
SHFQ7M4L6 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.27□□□□□ -1.73
SHFQ7M4L6 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
SHFQ7M4L6 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
SHFQ7M4L6 AC017104.4-201ENST00000636283 1592 ntBASIC4.27□□□□□ -1.73
SHFQ7M4L6 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
SHFQ7M4L6 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.26□□□□□ -1.73
SHFQ7M4L6 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.26□□□□□ -1.73
SHFQ7M4L6 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SHFQ7M4L6 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC4.26□□□□□ -1.73
SHFQ7M4L6 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.26□□□□□ -1.73
SHFQ7M4L6 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SHFQ7M4L6 BRAFP1-201ENST00000445336 2703 ntBASIC4.26□□□□□ -1.73
SHFQ7M4L6 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SHFQ7M4L6 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SHFQ7M4L6 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SHFQ7M4L6 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
SHFQ7M4L6 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.26□□□□□ -1.73
SHFQ7M4L6 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.26□□□□□ -1.73
SHFQ7M4L6 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
SHFQ7M4L6 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
SHFQ7M4L6 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SHFQ7M4L6 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
SHFQ7M4L6 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC4.26□□□□□ -1.73
SHFQ7M4L6 RNU6-1066P-201ENST00000363573 105 ntBASIC4.26□□□□□ -1.73
SHFQ7M4L6 RNA5SP372-201ENST00000390836 115 ntBASIC4.26□□□□□ -1.73
SHFQ7M4L6 TAF9BP1-201ENST00000396646 746 ntBASIC4.26□□□□□ -1.73
SHFQ7M4L6 TMSB4XP8-201ENST00000402089 135 ntBASIC4.26□□□□□ -1.73
SHFQ7M4L6 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SHFQ7M4L6 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.26□□□□□ -1.73
SHFQ7M4L6 RPL6P29-201ENST00000414863 865 ntBASIC4.26□□□□□ -1.73
SHFQ7M4L6 TMSB4XP6-201ENST00000415187 135 ntBASIC4.26□□□□□ -1.73
SHFQ7M4L6 LUZP4P1-201ENST00000415420 344 ntBASIC4.26□□□□□ -1.73
SHFQ7M4L6 AL365203.2-201ENST00000423444 196 ntBASIC4.26□□□□□ -1.73
SHFQ7M4L6 Z74021.1-201ENST00000423610 407 ntBASIC4.26□□□□□ -1.73
SHFQ7M4L6 TMSB4XP1-201ENST00000424567 135 ntBASIC4.26□□□□□ -1.73
SHFQ7M4L6 AC007559.1-201ENST00000428736 355 ntBASIC4.26□□□□□ -1.73
SHFQ7M4L6 RPS17P8-201ENST00000434525 335 ntBASIC4.26□□□□□ -1.73
SHFQ7M4L6 AC092013.1-201ENST00000438795 332 ntBASIC4.26□□□□□ -1.73
SHFQ7M4L6 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC4.26□□□□□ -1.73
SHFQ7M4L6 RPL12P11-201ENST00000439970 501 ntBASIC4.26□□□□□ -1.73
SHFQ7M4L6 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC4.26□□□□□ -1.73
SHFQ7M4L6 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC4.26□□□□□ -1.73
SHFQ7M4L6 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.26□□□□□ -1.73
SHFQ7M4L6 AL034418.1-201ENST00000448675 860 ntBASIC4.26□□□□□ -1.73
SHFQ7M4L6 NF1P3-201ENST00000457709 450 ntBASIC4.26□□□□□ -1.73
SHFQ7M4L6 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC4.26□□□□□ -1.73
SHFQ7M4L6 AC010469.1-201ENST00000463864 576 ntBASIC4.26□□□□□ -1.73
SHFQ7M4L6 RPL21P71-201ENST00000465598 459 ntBASIC4.26□□□□□ -1.73
SHFQ7M4L6 AC006511.1-201ENST00000470614 315 ntBASIC4.26□□□□□ -1.73
SHFQ7M4L6 ACTG1P13-201ENST00000486987 1043 ntBASIC4.26□□□□□ -1.73
SHFQ7M4L6 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.26□□□□□ -1.73
SHFQ7M4L6 MRPS33P2-201ENST00000507850 322 ntBASIC4.26□□□□□ -1.73
SHFQ7M4L6 AC011411.1-201ENST00000509592 876 ntBASIC4.26□□□□□ -1.73
SHFQ7M4L6 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SHFQ7M4L6 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC4.26□□□□□ -1.73
SHFQ7M4L6 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.26□□□□□ -1.73
SHFQ7M4L6 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC4.26□□□□□ -1.73
SHFQ7M4L6 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC4.26□□□□□ -1.73
SHFQ7M4L6 AP001207.1-201ENST00000524051 481 ntBASIC4.26□□□□□ -1.73
SHFQ7M4L6 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC4.26□□□□□ -1.73
SHFQ7M4L6 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SHFQ7M4L6 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC4.26□□□□□ -1.73
SHFQ7M4L6 AC135628.1-201ENST00000568867 534 ntBASIC4.26□□□□□ -1.73
SHFQ7M4L6 AC015912.2-201ENST00000571053 181 ntBASIC4.26□□□□□ -1.73
SHFQ7M4L6 AC012146.2-201ENST00000576545 416 ntBASIC4.26□□□□□ -1.73
SHFQ7M4L6 OR4K7P-201ENST00000580232 945 ntBASIC4.26□□□□□ -1.73
SHFQ7M4L6 MIR4691-201ENST00000583764 85 ntBASIC4.26□□□□□ -1.73
SHFQ7M4L6 PIGPP4-201ENST00000584447 307 ntBASIC4.26□□□□□ -1.73
SHFQ7M4L6 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.26□□□□□ -1.73
SHFQ7M4L6 AC008687.2-201ENST00000597865 520 ntBASIC4.26□□□□□ -1.73
SHFQ7M4L6 AC110760.3-201ENST00000598794 467 ntBASIC4.26□□□□□ -1.73
SHFQ7M4L6 VN1R82P-201ENST00000601481 356 ntBASIC4.26□□□□□ -1.73
SHFQ7M4L6 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC4.26□□□□□ -1.73
SHFQ7M4L6 AL358072.1-201ENST00000604156 575 ntBASIC4.26□□□□□ -1.73
SHFQ7M4L6 AC121247.2-201ENST00000604776 136 ntBASIC4.26□□□□□ -1.73
SHFQ7M4L6 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC4.26□□□□□ -1.73
SHFQ7M4L6 AC064807.4-201ENST00000607201 407 ntBASIC4.26□□□□□ -1.73
SHFQ7M4L6 AC093799.2-201ENST00000610062 578 ntBASIC4.26□□□□□ -1.73
SHFQ7M4L6 AC069209.1-201ENST00000619282 651 ntBASIC4.26□□□□□ -1.73
SHFQ7M4L6 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC4.26□□□□□ -1.73
SHFQ7M4L6 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SHFQ7M4L6 AC067931.1-201ENST00000624190 671 ntBASIC4.26□□□□□ -1.73
SHFQ7M4L6 ZNRD1ASP-221ENST00000637794 1074 ntBASIC4.26□□□□□ -1.73
SHFQ7M4L6 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.26□□□□□ -1.73
SHFQ7M4L6 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.26□□□□□ -1.73
SHFQ7M4L6 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
SHFQ7M4L6 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.26□□□□□ -1.73
SHFQ7M4L6 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.26□□□□□ -1.73
SHFQ7M4L6 MAPK10-263ENST00000641052 4307 ntBASIC4.25□□□□□ -1.73
SHFQ7M4L6 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
SHFQ7M4L6 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SHFQ7M4L6 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.25□□□□□ -1.73
SHFQ7M4L6 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SHFQ7M4L6 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 121 ms