Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 AL035404.1-201ENST00000497982 568 ntBASIC3.55□□□□□ -1.84
CX3CR1P49238 RN7SKP234-201ENST00000517173 224 ntBASIC3.55□□□□□ -1.84
CX3CR1P49238 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC3.55□□□□□ -1.84
CX3CR1P49238 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.55□□□□□ -1.84
CX3CR1P49238 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC3.55□□□□□ -1.84
CX3CR1P49238 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
CX3CR1P49238 AC007424.1-203ENST00000554613 687 ntBASIC3.55□□□□□ -1.84
CX3CR1P49238 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.55□□□□□ -1.84
CX3CR1P49238 AC018618.2-201ENST00000604770 446 ntBASIC3.55□□□□□ -1.84
CX3CR1P49238 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.55□□□□□ -1.84
CX3CR1P49238 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.55□□□□□ -1.84
CX3CR1P49238 C2orf27A-204ENST00000623058 969 ntBASIC3.55□□□□□ -1.84
CX3CR1P49238 AC016717.3-201ENST00000624730 554 ntBASIC3.55□□□□□ -1.84
CX3CR1P49238 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC3.55□□□□□ -1.84
CX3CR1P49238 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
CX3CR1P49238 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
CX3CR1P49238 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CX3CR1P49238 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CX3CR1P49238 ZNF33CP-201ENST00000432492 2030 ntBASIC3.54□□□□□ -1.84
CX3CR1P49238 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CX3CR1P49238 AC073429.2-201ENST00000569694 1444 ntBASIC3.54□□□□□ -1.84
CX3CR1P49238 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CX3CR1P49238 METTL21EP-201ENST00000298105 713 ntBASIC3.54□□□□□ -1.84
CX3CR1P49238 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.54□□□□□ -1.84
CX3CR1P49238 MIR3074-201ENST00000384885 81 ntBASIC3.54□□□□□ -1.84
CX3CR1P49238 AC136624.1-201ENST00000400791 413 ntBASIC3.54□□□□□ -1.84
CX3CR1P49238 AC087650.1-201ENST00000431445 468 ntBASIC3.54□□□□□ -1.84
CX3CR1P49238 TRIM60P13-201ENST00000432350 1283 ntBASIC3.54□□□□□ -1.84
CX3CR1P49238 ZNF965P-201ENST00000432501 817 ntBASIC3.54□□□□□ -1.84
CX3CR1P49238 CCNB1IP1P2-201ENST00000432876 818 ntBASIC3.54□□□□□ -1.84
CX3CR1P49238 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC3.54□□□□□ -1.84
CX3CR1P49238 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC3.54□□□□□ -1.84
CX3CR1P49238 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC3.54□□□□□ -1.84
CX3CR1P49238 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC3.54□□□□□ -1.84
CX3CR1P49238 RPL38P1-201ENST00000460914 211 ntBASIC3.54□□□□□ -1.84
CX3CR1P49238 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.54□□□□□ -1.84
CX3CR1P49238 HPRT1P2-201ENST00000505250 544 ntBASIC3.54□□□□□ -1.84
CX3CR1P49238 RNA5SP143-201ENST00000516936 115 ntBASIC3.54□□□□□ -1.84
CX3CR1P49238 AC008562.1-201ENST00000521763 330 ntBASIC3.54□□□□□ -1.84
CX3CR1P49238 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC3.54□□□□□ -1.84
CX3CR1P49238 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC3.54□□□□□ -1.84
CX3CR1P49238 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC3.54□□□□□ -1.84
CX3CR1P49238 AC009643.1-201ENST00000532030 391 ntBASIC3.54□□□□□ -1.84
CX3CR1P49238 AC092851.1-201ENST00000535964 478 ntBASIC3.54□□□□□ -1.84
CX3CR1P49238 CR383656.6-201ENST00000550518 394 ntBASIC3.54□□□□□ -1.84
CX3CR1P49238 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC3.54□□□□□ -1.84
CX3CR1P49238 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC3.54□□□□□ -1.84
CX3CR1P49238 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC3.54□□□□□ -1.84
CX3CR1P49238 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC3.54□□□□□ -1.84
CX3CR1P49238 AC011374.2-201ENST00000607135 526 ntBASIC3.54□□□□□ -1.84
CX3CR1P49238 AC025016.1-201ENST00000616746 682 ntBASIC3.54□□□□□ -1.84
CX3CR1P49238 AL591424.2-201ENST00000617023 128 ntBASIC3.54□□□□□ -1.84
CX3CR1P49238 MIR6864-201ENST00000617935 70 ntBASIC3.54□□□□□ -1.84
CX3CR1P49238 MIR3653-201ENST00000625572 110 ntBASIC3.54□□□□□ -1.84
CX3CR1P49238 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC3.54□□□□□ -1.84
CX3CR1P49238 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CX3CR1P49238 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
CX3CR1P49238 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CX3CR1P49238 AC005261.4-201ENST00000600047 1385 ntBASIC3.53□□□□□ -1.84
CX3CR1P49238 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.53□□□□□ -1.84
CX3CR1P49238 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC3.53□□□□□ -1.84
CX3CR1P49238 AC008725.1-201ENST00000605123 2263 ntBASIC3.53□□□□□ -1.84
CX3CR1P49238 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.53□□□□□ -1.84
CX3CR1P49238 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
CX3CR1P49238 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC3.53□□□□□ -1.84
CX3CR1P49238 METTL5-204ENST00000409340 472 ntTSL 5 BASIC3.53□□□□□ -1.84
CX3CR1P49238 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC3.53□□□□□ -1.84
CX3CR1P49238 VTA1P1-201ENST00000414044 866 ntBASIC3.53□□□□□ -1.84
CX3CR1P49238 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC3.53□□□□□ -1.84
CX3CR1P49238 CYP4F29P-201ENST00000420685 446 ntBASIC3.53□□□□□ -1.84
CX3CR1P49238 RPL7P53-201ENST00000421245 739 ntBASIC3.53□□□□□ -1.84
CX3CR1P49238 AL592293.2-201ENST00000422292 996 ntBASIC3.53□□□□□ -1.84
CX3CR1P49238 MTND4P24-201ENST00000424002 397 ntBASIC3.53□□□□□ -1.84
CX3CR1P49238 OR5BE1P-201ENST00000425977 939 ntBASIC3.53□□□□□ -1.84
CX3CR1P49238 PPIAP17-201ENST00000438507 471 ntBASIC3.53□□□□□ -1.84
CX3CR1P49238 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC3.53□□□□□ -1.84
CX3CR1P49238 RPS7P5-201ENST00000441482 581 ntBASIC3.53□□□□□ -1.84
CX3CR1P49238 EIF2S2P2-201ENST00000447161 982 ntBASIC3.53□□□□□ -1.84
CX3CR1P49238 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC3.53□□□□□ -1.84
CX3CR1P49238 AP000873.1-201ENST00000463987 400 ntBASIC3.53□□□□□ -1.84
CX3CR1P49238 RN7SL271P-201ENST00000487601 295 ntBASIC3.53□□□□□ -1.84
CX3CR1P49238 RPS27AP13-201ENST00000498403 237 ntBASIC3.53□□□□□ -1.84
CX3CR1P49238 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.53□□□□□ -1.84
CX3CR1P49238 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC3.53□□□□□ -1.84
CX3CR1P49238 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.53□□□□□ -1.84
CX3CR1P49238 AC106806.2-201ENST00000509365 500 ntBASIC3.53□□□□□ -1.84
CX3CR1P49238 AC005351.1-201ENST00000511152 786 ntBASIC3.53□□□□□ -1.84
CX3CR1P49238 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC3.53□□□□□ -1.84
CX3CR1P49238 AC005798.1-201ENST00000513715 387 ntBASIC3.53□□□□□ -1.84
CX3CR1P49238 AC010342.1-201ENST00000514047 877 ntBASIC3.53□□□□□ -1.84
CX3CR1P49238 AC008494.2-201ENST00000514544 370 ntBASIC3.53□□□□□ -1.84
CX3CR1P49238 RN7SKP283-201ENST00000517197 270 ntBASIC3.53□□□□□ -1.84
CX3CR1P49238 MTND1P6-201ENST00000523621 946 ntBASIC3.53□□□□□ -1.84
CX3CR1P49238 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.53□□□□□ -1.84
CX3CR1P49238 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC3.53□□□□□ -1.84
CX3CR1P49238 ASB8-204ENST00000536071 568 ntTSL 4 BASIC3.53□□□□□ -1.84
CX3CR1P49238 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC3.53□□□□□ -1.84
CX3CR1P49238 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC3.53□□□□□ -1.84
CX3CR1P49238 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC3.53□□□□□ -1.84
CX3CR1P49238 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms