Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
TNFP01375 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
TNFP01375 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
TNFP01375 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
TNFP01375 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC3.54□□□□□ -1.84
TNFP01375 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
TNFP01375 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC3.54□□□□□ -1.84
TNFP01375 RNU6-1320P-201ENST00000390838 107 ntBASIC3.54□□□□□ -1.84
TNFP01375 RNU6-1269P-201ENST00000391139 107 ntBASIC3.54□□□□□ -1.84
TNFP01375 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC3.54□□□□□ -1.84
TNFP01375 AL035458.1-201ENST00000433096 585 ntBASIC3.54□□□□□ -1.84
TNFP01375 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC3.54□□□□□ -1.84
TNFP01375 RNU6-599P-201ENST00000459383 107 ntBASIC3.54□□□□□ -1.84
TNFP01375 RNU6-1193P-201ENST00000459461 107 ntBASIC3.54□□□□□ -1.84
TNFP01375 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC3.54□□□□□ -1.84
TNFP01375 AC098583.1-201ENST00000480875 255 ntBASIC3.54□□□□□ -1.84
TNFP01375 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.54□□□□□ -1.84
TNFP01375 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.54□□□□□ -1.84
TNFP01375 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
TNFP01375 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.54□□□□□ -1.84
TNFP01375 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC3.54□□□□□ -1.84
TNFP01375 RNU6-368P-201ENST00000620928 107 ntBASIC3.54□□□□□ -1.84
TNFP01375 RNU6-538P-201ENST00000622329 107 ntBASIC3.54□□□□□ -1.84
TNFP01375 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.54□□□□□ -1.84
TNFP01375 U6.105-201ENST00000637379 88 ntBASIC3.54□□□□□ -1.84
TNFP01375 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
TNFP01375 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
TNFP01375 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
TNFP01375 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.54□□□□□ -1.84
TNFP01375 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.53□□□□□ -1.84
TNFP01375 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.53□□□□□ -1.84
TNFP01375 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
TNFP01375 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC3.53□□□□□ -1.84
TNFP01375 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
TNFP01375 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
TNFP01375 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.53□□□□□ -1.84
TNFP01375 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
TNFP01375 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
TNFP01375 Y_RNA.333-201ENST00000365274 102 ntBASIC3.53□□□□□ -1.84
TNFP01375 AC007068.1-201ENST00000396690 844 ntBASIC3.53□□□□□ -1.84
TNFP01375 MTHFD2P2-201ENST00000407725 247 ntBASIC3.53□□□□□ -1.84
TNFP01375 SNORA11.1-201ENST00000408133 129 ntBASIC3.53□□□□□ -1.84
TNFP01375 RN7SKP177-201ENST00000410567 355 ntBASIC3.53□□□□□ -1.84
TNFP01375 AL391219.1-201ENST00000422570 483 ntBASIC3.53□□□□□ -1.84
TNFP01375 AL159987.2-201ENST00000432754 307 ntBASIC3.53□□□□□ -1.84
TNFP01375 CYCSP43-201ENST00000438233 310 ntBASIC3.53□□□□□ -1.84
TNFP01375 AL356535.1-201ENST00000440335 398 ntBASIC3.53□□□□□ -1.84
TNFP01375 RPL23AP12-201ENST00000467573 473 ntBASIC3.53□□□□□ -1.84
TNFP01375 SYT14P1-201ENST00000481459 721 ntBASIC3.53□□□□□ -1.84
TNFP01375 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
TNFP01375 AC139783.2-201ENST00000504847 1145 ntBASIC3.53□□□□□ -1.84
TNFP01375 MTHFD2P4-201ENST00000515074 1025 ntBASIC3.53□□□□□ -1.84
TNFP01375 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC3.53□□□□□ -1.84
TNFP01375 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.53□□□□□ -1.84
TNFP01375 AC023161.2-201ENST00000551218 780 ntBASIC3.53□□□□□ -1.84
TNFP01375 CD24P2-201ENST00000565486 219 ntBASIC3.53□□□□□ -1.84
TNFP01375 AC115621.1-201ENST00000604653 858 ntBASIC3.53□□□□□ -1.84
TNFP01375 AC006077.1-201ENST00000604746 343 ntBASIC3.53□□□□□ -1.84
TNFP01375 AL159169.3-201ENST00000608871 561 ntBASIC3.53□□□□□ -1.84
TNFP01375 AC078899.5-201ENST00000612475 178 ntBASIC3.53□□□□□ -1.84
TNFP01375 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC3.53□□□□□ -1.84
TNFP01375 MIR7975-201ENST00000619350 68 ntBASIC3.53□□□□□ -1.84
TNFP01375 AC103858.2-201ENST00000621471 543 ntBASIC3.53□□□□□ -1.84
TNFP01375 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.53□□□□□ -1.84
TNFP01375 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
TNFP01375 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.53□□□□□ -1.84
TNFP01375 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
TNFP01375 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
TNFP01375 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC3.52□□□□□ -1.85
TNFP01375 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
TNFP01375 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
TNFP01375 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.52□□□□□ -1.85
TNFP01375 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.52□□□□□ -1.85
TNFP01375 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
TNFP01375 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
TNFP01375 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
TNFP01375 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC3.52□□□□□ -1.85
TNFP01375 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.52□□□□□ -1.85
TNFP01375 HSPE1P8-201ENST00000406997 288 ntBASIC3.52□□□□□ -1.85
TNFP01375 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.52□□□□□ -1.85
TNFP01375 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC3.52□□□□□ -1.85
TNFP01375 YWHAQP9-201ENST00000445891 512 ntBASIC3.52□□□□□ -1.85
TNFP01375 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.52□□□□□ -1.85
TNFP01375 AC074250.1-201ENST00000511117 192 ntBASIC3.52□□□□□ -1.85
TNFP01375 AC010342.1-201ENST00000514047 877 ntBASIC3.52□□□□□ -1.85
TNFP01375 SNORA70.18-201ENST00000516696 98 ntBASIC3.52□□□□□ -1.85
TNFP01375 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC3.52□□□□□ -1.85
TNFP01375 AC107016.1-201ENST00000550463 337 ntBASIC3.52□□□□□ -1.85
TNFP01375 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.52□□□□□ -1.85
TNFP01375 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.52□□□□□ -1.85
TNFP01375 AC025946.2-201ENST00000603398 234 ntBASIC3.52□□□□□ -1.85
TNFP01375 AC007179.3-201ENST00000604976 235 ntBASIC3.52□□□□□ -1.85
TNFP01375 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC3.52□□□□□ -1.85
TNFP01375 AC067852.7-201ENST00000623270 535 ntBASIC3.52□□□□□ -1.85
TNFP01375 AP003355.3-201ENST00000623465 114 ntBASIC3.52□□□□□ -1.85
TNFP01375 AL732372.2-225ENST00000642124 456 ntBASIC3.52□□□□□ -1.85
TNFP01375 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
TNFP01375 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
TNFP01375 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
TNFP01375 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms