Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC7.31□□□□□ -1.24
RNF40O75150 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC7.31□□□□□ -1.24
RNF40O75150 MIR6849-201ENST00000618543 69 ntBASIC7.31□□□□□ -1.24
RNF40O75150 AC211486.4-201ENST00000621495 113 ntBASIC7.31□□□□□ -1.24
RNF40O75150 ANKRD31-201ENST00000274361 6036 ntAPPRIS P2 TSL 5 BASIC7.31□□□□□ -1.24
RNF40O75150 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC7.31□□□□□ -1.24
RNF40O75150 DDX18P4-201ENST00000511690 1966 ntBASIC7.31□□□□□ -1.24
RNF40O75150 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
RNF40O75150 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
RNF40O75150 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC7.31□□□□□ -1.24
RNF40O75150 AL049647.1-201ENST00000319682 1789 ntTSL 2 BASIC7.31□□□□□ -1.24
RNF40O75150 LINC02275-201ENST00000508313 4365 ntTSL 2 BASIC7.3□□□□□ -1.24
RNF40O75150 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
RNF40O75150 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
RNF40O75150 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC7.3□□□□□ -1.24
RNF40O75150 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC7.3□□□□□ -1.24
RNF40O75150 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC7.3□□□□□ -1.24
RNF40O75150 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
RNF40O75150 ARHGAP20-203ENST00000527598 5998 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
RNF40O75150 SCGB1A1-201ENST00000278282 441 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
RNF40O75150 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
RNF40O75150 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
RNF40O75150 Y_RNA.14-201ENST00000362415 103 ntBASIC7.3□□□□□ -1.24
RNF40O75150 RNA5SP472-201ENST00000363868 119 ntBASIC7.3□□□□□ -1.24
RNF40O75150 SNORD116-11-201ENST00000383882 92 ntBASIC7.3□□□□□ -1.24
RNF40O75150 TRBV25-1-202ENST00000390398 381 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
RNF40O75150 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
RNF40O75150 TANK-203ENST00000402568 878 ntTSL 5 BASIC7.3□□□□□ -1.24
RNF40O75150 RN7SKP146-201ENST00000410242 334 ntBASIC7.3□□□□□ -1.24
RNF40O75150 RNU2-38P-201ENST00000410856 79 ntBASIC7.3□□□□□ -1.24
RNF40O75150 AC009229.2-201ENST00000417213 351 ntTSL 3 BASIC7.3□□□□□ -1.24
RNF40O75150 AL590135.1-201ENST00000422215 156 ntBASIC7.3□□□□□ -1.24
RNF40O75150 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC7.3□□□□□ -1.24
RNF40O75150 AL451136.1-201ENST00000435399 325 ntBASIC7.3□□□□□ -1.24
RNF40O75150 YWHAZP8-201ENST00000436935 731 ntBASIC7.3□□□□□ -1.24
RNF40O75150 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC7.3□□□□□ -1.24
RNF40O75150 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
RNF40O75150 RPS15AP1-201ENST00000457423 391 ntBASIC7.3□□□□□ -1.24
RNF40O75150 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC7.3□□□□□ -1.24
RNF40O75150 UBA52P3-201ENST00000491303 382 ntBASIC7.3□□□□□ -1.24
RNF40O75150 AC104825.1-201ENST00000503186 685 ntTSL 3 BASIC7.3□□□□□ -1.24
RNF40O75150 PRMT5P1-201ENST00000514351 598 ntBASIC7.3□□□□□ -1.24
RNF40O75150 IGHVIII-26-1-201ENST00000520387 250 ntBASIC7.3□□□□□ -1.24
RNF40O75150 AC013546.1-201ENST00000523232 564 ntTSL 4 BASIC7.3□□□□□ -1.24
RNF40O75150 OR5M6P-201ENST00000530227 937 ntBASIC7.3□□□□□ -1.24
RNF40O75150 MGST1-215ENST00000540056 546 ntTSL 3 BASIC7.3□□□□□ -1.24
RNF40O75150 MDM2-233ENST00000545204 398 ntTSL 5 BASIC7.3□□□□□ -1.24
RNF40O75150 AC023827.2-201ENST00000566880 1061 ntBASIC7.3□□□□□ -1.24
RNF40O75150 EEF1B2P1-201ENST00000567221 672 ntBASIC7.3□□□□□ -1.24
RNF40O75150 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC7.3□□□□□ -1.24
RNF40O75150 AC027801.5-201ENST00000574365 416 ntTSL 3 BASIC7.3□□□□□ -1.24
RNF40O75150 MIR4703-201ENST00000577728 79 ntBASIC7.3□□□□□ -1.24
RNF40O75150 SNORA70D-201ENST00000578836 135 ntBASIC7.3□□□□□ -1.24
RNF40O75150 AC015818.3-202ENST00000579603 283 ntTSL 5 BASIC7.3□□□□□ -1.24
RNF40O75150 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC7.3□□□□□ -1.24
RNF40O75150 AL353997.4-201ENST00000586196 166 ntBASIC7.3□□□□□ -1.24
RNF40O75150 AC078899.3-201ENST00000599065 212 ntBASIC7.3□□□□□ -1.24
RNF40O75150 AC036176.3-201ENST00000602456 418 ntBASIC7.3□□□□□ -1.24
RNF40O75150 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC7.3□□□□□ -1.24
RNF40O75150 AC019257.2-201ENST00000605539 497 ntBASIC7.3□□□□□ -1.24
RNF40O75150 MIR7973-1-201ENST00000614683 76 ntBASIC7.3□□□□□ -1.24
RNF40O75150 UOX-205ENST00000640983 544 ntTSL 4 BASIC7.3□□□□□ -1.24
RNF40O75150 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC7.3□□□□□ -1.24
RNF40O75150 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC7.3□□□□□ -1.24
RNF40O75150 IARS-205ENST00000443024 4341 ntTSL 5 BASIC7.3□□□□□ -1.24
RNF40O75150 BRAFP1-201ENST00000445336 2703 ntBASIC7.3□□□□□ -1.24
RNF40O75150 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
RNF40O75150 MAPK10-207ENST00000395166 3085 ntAPPRIS P2 TSL 2 BASIC7.3□□□□□ -1.24
RNF40O75150 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC7.3□□□□□ -1.24
RNF40O75150 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
RNF40O75150 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
RNF40O75150 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC7.3□□□□□ -1.24
RNF40O75150 TMCC1P1-201ENST00000518897 1980 ntBASIC7.29□□□□□ -1.24
RNF40O75150 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC7.29□□□□□ -1.24
RNF40O75150 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
RNF40O75150 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC7.29□□□□□ -1.24
RNF40O75150 KIAA1524-207ENST00000619684 2839 ntAPPRIS ALT1 TSL 5 BASIC7.29□□□□□ -1.24
RNF40O75150 AC091812.1-201ENST00000432235 1948 ntBASIC7.29□□□□□ -1.24
RNF40O75150 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
RNF40O75150 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
RNF40O75150 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
RNF40O75150 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC7.29□□□□□ -1.24
RNF40O75150 OR55B1P-203ENST00000641518 2602 ntBASIC7.29□□□□□ -1.24
RNF40O75150 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
RNF40O75150 RNU6-490P-201ENST00000362985 107 ntBASIC7.29□□□□□ -1.24
RNF40O75150 RN7SKP205-201ENST00000410999 307 ntBASIC7.29□□□□□ -1.24
RNF40O75150 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC7.29□□□□□ -1.24
RNF40O75150 AC083862.1-201ENST00000427378 1242 ntBASIC7.29□□□□□ -1.24
RNF40O75150 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC7.29□□□□□ -1.24
RNF40O75150 MTATP6P16-201ENST00000434543 526 ntBASIC7.29□□□□□ -1.24
RNF40O75150 AL451139.1-201ENST00000434718 346 ntBASIC7.29□□□□□ -1.24
RNF40O75150 RPL7P28-201ENST00000437739 740 ntBASIC7.29□□□□□ -1.24
RNF40O75150 RPL21P2-201ENST00000440049 481 ntBASIC7.29□□□□□ -1.24
RNF40O75150 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC7.29□□□□□ -1.24
RNF40O75150 RPSAP7-201ENST00000456871 885 ntBASIC7.29□□□□□ -1.24
RNF40O75150 RNU7-182P-201ENST00000459009 62 ntBASIC7.29□□□□□ -1.24
RNF40O75150 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC7.29□□□□□ -1.24
RNF40O75150 AC021205.1-201ENST00000468797 348 ntBASIC7.29□□□□□ -1.24
RNF40O75150 AC026784.1-201ENST00000507986 352 ntBASIC7.29□□□□□ -1.24
RNF40O75150 RNU6-182P-201ENST00000516970 105 ntBASIC7.29□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 149.6 ms