Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC4.13□□□□□ -1.75
PRKNO60260 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.13□□□□□ -1.75
PRKNO60260 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC4.13□□□□□ -1.75
PRKNO60260 SNORA3.4-201ENST00000515969 96 ntBASIC4.13□□□□□ -1.75
PRKNO60260 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC4.13□□□□□ -1.75
PRKNO60260 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.13□□□□□ -1.75
PRKNO60260 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC4.13□□□□□ -1.75
PRKNO60260 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PRKNO60260 AC124293.1-201ENST00000530034 493 ntBASIC4.13□□□□□ -1.75
PRKNO60260 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PRKNO60260 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.13□□□□□ -1.75
PRKNO60260 AC044913.1-201ENST00000557200 430 ntBASIC4.13□□□□□ -1.75
PRKNO60260 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC4.13□□□□□ -1.75
PRKNO60260 MIR3936-201ENST00000584304 110 ntBASIC4.13□□□□□ -1.75
PRKNO60260 EIF1P6-201ENST00000600054 334 ntBASIC4.13□□□□□ -1.75
PRKNO60260 AL353778.1-201ENST00000603149 408 ntBASIC4.13□□□□□ -1.75
PRKNO60260 BPIFA4P-203ENST00000603168 689 ntBASIC4.13□□□□□ -1.75
PRKNO60260 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.13□□□□□ -1.75
PRKNO60260 AC008966.2-201ENST00000606157 453 ntBASIC4.13□□□□□ -1.75
PRKNO60260 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.13□□□□□ -1.75
PRKNO60260 U6.48-201ENST00000618523 106 ntBASIC4.13□□□□□ -1.75
PRKNO60260 AC011944.2-201ENST00000624440 683 ntBASIC4.13□□□□□ -1.75
PRKNO60260 AC015726.3-201ENST00000624501 418 ntBASIC4.13□□□□□ -1.75
PRKNO60260 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.13□□□□□ -1.75
PRKNO60260 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC4.13□□□□□ -1.75
PRKNO60260 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.13□□□□□ -1.75
PRKNO60260 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.13□□□□□ -1.75
PRKNO60260 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
PRKNO60260 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PRKNO60260 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.13□□□□□ -1.75
PRKNO60260 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
PRKNO60260 AC010329.2-201ENST00000595195 2737 ntBASIC4.13□□□□□ -1.75
PRKNO60260 MTCO1P6-201ENST00000481192 1384 ntBASIC4.13□□□□□ -1.75
PRKNO60260 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
PRKNO60260 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC4.12□□□□□ -1.75
PRKNO60260 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
PRKNO60260 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
PRKNO60260 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
PRKNO60260 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
PRKNO60260 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC4.12□□□□□ -1.75
PRKNO60260 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
PRKNO60260 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
PRKNO60260 AC012321.1-201ENST00000561622 1588 ntBASIC4.12□□□□□ -1.75
PRKNO60260 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
PRKNO60260 MIR331-201ENST00000362302 94 ntBASIC4.12□□□□□ -1.75
PRKNO60260 RNU6-1214P-201ENST00000363650 109 ntBASIC4.12□□□□□ -1.75
PRKNO60260 SNORD116.1-201ENST00000365628 92 ntBASIC4.12□□□□□ -1.75
PRKNO60260 RNU6-413P-201ENST00000384115 107 ntBASIC4.12□□□□□ -1.75
PRKNO60260 RNU6-178P-201ENST00000384631 104 ntBASIC4.12□□□□□ -1.75
PRKNO60260 SNORA40.2-201ENST00000390847 128 ntBASIC4.12□□□□□ -1.75
PRKNO60260 AL049545.1-201ENST00000401856 572 ntBASIC4.12□□□□□ -1.75
PRKNO60260 AL590084.1-201ENST00000407885 387 ntBASIC4.12□□□□□ -1.75
PRKNO60260 SNORA11C-201ENST00000408532 129 ntBASIC4.12□□□□□ -1.75
PRKNO60260 RNU6-77P-201ENST00000410554 91 ntBASIC4.12□□□□□ -1.75
PRKNO60260 RN7SKP247-201ENST00000411094 308 ntBASIC4.12□□□□□ -1.75
PRKNO60260 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC4.12□□□□□ -1.75
PRKNO60260 AC114814.2-201ENST00000419195 485 ntBASIC4.12□□□□□ -1.75
PRKNO60260 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC4.12□□□□□ -1.75
PRKNO60260 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC4.12□□□□□ -1.75
PRKNO60260 C4BPAP2-201ENST00000428434 478 ntBASIC4.12□□□□□ -1.75
PRKNO60260 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC4.12□□□□□ -1.75
PRKNO60260 MTND5P25-201ENST00000430499 799 ntBASIC4.12□□□□□ -1.75
PRKNO60260 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC4.12□□□□□ -1.75
PRKNO60260 UBE2V1P3-201ENST00000439651 417 ntBASIC4.12□□□□□ -1.75
PRKNO60260 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
PRKNO60260 OR6K5P-201ENST00000447050 945 ntBASIC4.12□□□□□ -1.75
PRKNO60260 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC4.12□□□□□ -1.75
PRKNO60260 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC4.12□□□□□ -1.75
PRKNO60260 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC4.12□□□□□ -1.75
PRKNO60260 RPL7AP52-201ENST00000458096 790 ntBASIC4.12□□□□□ -1.75
PRKNO60260 AL591473.1-201ENST00000464297 313 ntBASIC4.12□□□□□ -1.75
PRKNO60260 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC4.12□□□□□ -1.75
PRKNO60260 AC073522.1-201ENST00000483312 377 ntBASIC4.12□□□□□ -1.75
PRKNO60260 AC026979.1-201ENST00000492525 396 ntBASIC4.12□□□□□ -1.75
PRKNO60260 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC4.12□□□□□ -1.75
PRKNO60260 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.12□□□□□ -1.75
PRKNO60260 AC113347.3-201ENST00000509113 148 ntBASIC4.12□□□□□ -1.75
PRKNO60260 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.12□□□□□ -1.75
PRKNO60260 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC4.12□□□□□ -1.75
PRKNO60260 AC107918.3-201ENST00000533272 382 ntBASIC4.12□□□□□ -1.75
PRKNO60260 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.12□□□□□ -1.75
PRKNO60260 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC4.12□□□□□ -1.75
PRKNO60260 AC090695.1-201ENST00000561269 1222 ntBASIC4.12□□□□□ -1.75
PRKNO60260 MIR4284-201ENST00000578924 81 ntBASIC4.12□□□□□ -1.75
PRKNO60260 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.12□□□□□ -1.75
PRKNO60260 AC021749.1-201ENST00000604322 607 ntBASIC4.12□□□□□ -1.75
PRKNO60260 TUSC7.1-201ENST00000610969 165 ntBASIC4.12□□□□□ -1.75
PRKNO60260 AC083809.1-201ENST00000615051 472 ntBASIC4.12□□□□□ -1.75
PRKNO60260 AC091905.2-201ENST00000623143 306 ntBASIC4.12□□□□□ -1.75
PRKNO60260 AC004777.1-201ENST00000624317 287 ntBASIC4.12□□□□□ -1.75
PRKNO60260 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC4.12□□□□□ -1.75
PRKNO60260 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.12□□□□□ -1.75
PRKNO60260 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
PRKNO60260 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.12□□□□□ -1.75
PRKNO60260 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
PRKNO60260 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
PRKNO60260 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.12□□□□□ -1.75
PRKNO60260 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.12□□□□□ -1.75
PRKNO60260 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.12□□□□□ -1.75
PRKNO60260 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms