Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 RPL12P28-201ENST00000430852 489 ntBASIC4.53□□□□□ -1.68
PCDH9Q9HC56 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC4.53□□□□□ -1.68
PCDH9Q9HC56 HLA-N-201ENST00000437516 135 ntBASIC4.53□□□□□ -1.68
PCDH9Q9HC56 AC114495.1-201ENST00000441274 436 ntBASIC4.53□□□□□ -1.68
PCDH9Q9HC56 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.53□□□□□ -1.68
PCDH9Q9HC56 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC4.53□□□□□ -1.68
PCDH9Q9HC56 NDUFA12P1-201ENST00000455914 406 ntBASIC4.53□□□□□ -1.68
PCDH9Q9HC56 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
PCDH9Q9HC56 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC4.53□□□□□ -1.68
PCDH9Q9HC56 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC4.53□□□□□ -1.68
PCDH9Q9HC56 AK3P4-201ENST00000504283 583 ntBASIC4.53□□□□□ -1.68
PCDH9Q9HC56 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC4.53□□□□□ -1.68
PCDH9Q9HC56 AC104108.1-201ENST00000509930 412 ntBASIC4.53□□□□□ -1.68
PCDH9Q9HC56 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC4.53□□□□□ -1.68
PCDH9Q9HC56 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC4.53□□□□□ -1.68
PCDH9Q9HC56 IFITM8P-201ENST00000522529 394 ntBASIC4.53□□□□□ -1.68
PCDH9Q9HC56 PHBP17-201ENST00000528576 541 ntBASIC4.53□□□□□ -1.68
PCDH9Q9HC56 DUXAP5-201ENST00000529668 529 ntBASIC4.53□□□□□ -1.68
PCDH9Q9HC56 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC4.53□□□□□ -1.68
PCDH9Q9HC56 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC4.53□□□□□ -1.68
PCDH9Q9HC56 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC4.53□□□□□ -1.68
PCDH9Q9HC56 AC090515.3-201ENST00000560431 315 ntBASIC4.53□□□□□ -1.68
PCDH9Q9HC56 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.53□□□□□ -1.68
PCDH9Q9HC56 AC125494.3-201ENST00000602759 455 ntBASIC4.53□□□□□ -1.68
PCDH9Q9HC56 AC104785.1-201ENST00000603220 588 ntBASIC4.53□□□□□ -1.68
PCDH9Q9HC56 AC020634.1-201ENST00000608701 549 ntBASIC4.53□□□□□ -1.68
PCDH9Q9HC56 AC004908.3-201ENST00000610248 625 ntBASIC4.53□□□□□ -1.68
PCDH9Q9HC56 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC4.53□□□□□ -1.68
PCDH9Q9HC56 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
PCDH9Q9HC56 AC013470.4-201ENST00000619978 986 ntBASIC4.53□□□□□ -1.68
PCDH9Q9HC56 AP000346.3-201ENST00000622821 210 ntBASIC4.53□□□□□ -1.68
PCDH9Q9HC56 AC024595.1-201ENST00000623088 387 ntBASIC4.53□□□□□ -1.68
PCDH9Q9HC56 AC019278.1-201ENST00000623516 479 ntBASIC4.53□□□□□ -1.68
PCDH9Q9HC56 AC006065.6-201ENST00000625201 545 ntBASIC4.53□□□□□ -1.68
PCDH9Q9HC56 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC4.53□□□□□ -1.68
PCDH9Q9HC56 AL121594.5-201ENST00000631724 573 ntBASIC4.53□□□□□ -1.68
PCDH9Q9HC56 U6.107-201ENST00000637108 79 ntBASIC4.53□□□□□ -1.68
PCDH9Q9HC56 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
PCDH9Q9HC56 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC4.53□□□□□ -1.68
PCDH9Q9HC56 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.53□□□□□ -1.68
PCDH9Q9HC56 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC4.53□□□□□ -1.68
PCDH9Q9HC56 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
PCDH9Q9HC56 RAD17P1-201ENST00000418130 2042 ntBASIC4.53□□□□□ -1.68
PCDH9Q9HC56 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
PCDH9Q9HC56 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
PCDH9Q9HC56 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
PCDH9Q9HC56 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.52□□□□□ -1.69
PCDH9Q9HC56 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.52□□□□□ -1.69
PCDH9Q9HC56 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.52□□□□□ -1.69
PCDH9Q9HC56 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.52□□□□□ -1.69
PCDH9Q9HC56 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
PCDH9Q9HC56 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
PCDH9Q9HC56 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.52□□□□□ -1.69
PCDH9Q9HC56 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC4.52□□□□□ -1.69
PCDH9Q9HC56 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
PCDH9Q9HC56 OR10J6P-201ENST00000289731 930 ntBASIC4.52□□□□□ -1.69
PCDH9Q9HC56 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.52□□□□□ -1.69
PCDH9Q9HC56 ANKRD36P1-201ENST00000344424 659 ntBASIC4.52□□□□□ -1.69
PCDH9Q9HC56 SNORA62.2-201ENST00000364672 152 ntBASIC4.52□□□□□ -1.69
PCDH9Q9HC56 MIR129-1-201ENST00000384972 72 ntBASIC4.52□□□□□ -1.69
PCDH9Q9HC56 RNU6-1242P-201ENST00000391052 103 ntBASIC4.52□□□□□ -1.69
PCDH9Q9HC56 RPS4XP9-201ENST00000405151 780 ntBASIC4.52□□□□□ -1.69
PCDH9Q9HC56 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.52□□□□□ -1.69
PCDH9Q9HC56 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.52□□□□□ -1.69
PCDH9Q9HC56 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.52□□□□□ -1.69
PCDH9Q9HC56 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
PCDH9Q9HC56 RPS20P14-201ENST00000412545 360 ntBASIC4.52□□□□□ -1.69
PCDH9Q9HC56 RPL26P29-201ENST00000415623 438 ntBASIC4.52□□□□□ -1.69
PCDH9Q9HC56 RPS3AP37-201ENST00000419176 745 ntBASIC4.52□□□□□ -1.69
PCDH9Q9HC56 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC4.52□□□□□ -1.69
PCDH9Q9HC56 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC4.52□□□□□ -1.69
PCDH9Q9HC56 RPL7P29-201ENST00000437151 728 ntBASIC4.52□□□□□ -1.69
PCDH9Q9HC56 Z73417.1-201ENST00000447373 778 ntBASIC4.52□□□□□ -1.69
PCDH9Q9HC56 AL050341.1-201ENST00000447743 313 ntBASIC4.52□□□□□ -1.69
PCDH9Q9HC56 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC4.52□□□□□ -1.69
PCDH9Q9HC56 AC005410.1-202ENST00000460347 485 ntBASIC4.52□□□□□ -1.69
PCDH9Q9HC56 NAP1L1P3-201ENST00000462291 880 ntBASIC4.52□□□□□ -1.69
PCDH9Q9HC56 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC4.52□□□□□ -1.69
PCDH9Q9HC56 RN7SL738P-201ENST00000470264 297 ntBASIC4.52□□□□□ -1.69
PCDH9Q9HC56 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.52□□□□□ -1.69
PCDH9Q9HC56 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC4.52□□□□□ -1.69
PCDH9Q9HC56 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC4.52□□□□□ -1.69
PCDH9Q9HC56 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC4.52□□□□□ -1.69
PCDH9Q9HC56 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC4.52□□□□□ -1.69
PCDH9Q9HC56 BOLA3P3-201ENST00000505182 232 ntBASIC4.52□□□□□ -1.69
PCDH9Q9HC56 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.52□□□□□ -1.69
PCDH9Q9HC56 AC119751.1-201ENST00000513357 765 ntBASIC4.52□□□□□ -1.69
PCDH9Q9HC56 NDUFB4P12-201ENST00000513465 390 ntBASIC4.52□□□□□ -1.69
PCDH9Q9HC56 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC4.52□□□□□ -1.69
PCDH9Q9HC56 AC083923.1-201ENST00000523708 376 ntBASIC4.52□□□□□ -1.69
PCDH9Q9HC56 AC090819.1-201ENST00000523800 1111 ntBASIC4.52□□□□□ -1.69
PCDH9Q9HC56 AC023538.1-201ENST00000534576 736 ntBASIC4.52□□□□□ -1.69
PCDH9Q9HC56 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
PCDH9Q9HC56 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC4.52□□□□□ -1.69
PCDH9Q9HC56 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.52□□□□□ -1.69
PCDH9Q9HC56 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.52□□□□□ -1.69
PCDH9Q9HC56 MIR4330-201ENST00000579077 105 ntBASIC4.52□□□□□ -1.69
PCDH9Q9HC56 ZNF92P3-201ENST00000596594 954 ntBASIC4.52□□□□□ -1.69
PCDH9Q9HC56 RPL12P25-202ENST00000598100 674 ntBASIC4.52□□□□□ -1.69
PCDH9Q9HC56 AC233280.2-201ENST00000603917 1070 ntBASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms