Protein–RNA interactions for Protein: Q9BXA9

SALL3, Sal-like protein 3, humanhuman

Predictions only

Length 1,300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL3Q9BXA9 AL049737.1-201ENST00000413920 1403 ntBASIC5.41□□□□□ -1.54
SALL3Q9BXA9 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SALL3Q9BXA9 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
SALL3Q9BXA9 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SALL3Q9BXA9 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.41□□□□□ -1.54
SALL3Q9BXA9 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
SALL3Q9BXA9 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
SALL3Q9BXA9 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
SALL3Q9BXA9 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC5.4□□□□□ -1.54
SALL3Q9BXA9 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC5.4□□□□□ -1.54
SALL3Q9BXA9 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
SALL3Q9BXA9 AL121839.2-201ENST00000565058 6943 ntBASIC5.4□□□□□ -1.54
SALL3Q9BXA9 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
SALL3Q9BXA9 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.4□□□□□ -1.54
SALL3Q9BXA9 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
SALL3Q9BXA9 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC5.4□□□□□ -1.55
SALL3Q9BXA9 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC5.4□□□□□ -1.55
SALL3Q9BXA9 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC5.4□□□□□ -1.55
SALL3Q9BXA9 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC5.4□□□□□ -1.55
SALL3Q9BXA9 RNU6-1005P-201ENST00000384519 107 ntBASIC5.4□□□□□ -1.55
SALL3Q9BXA9 RNU6-83P-201ENST00000384568 112 ntBASIC5.4□□□□□ -1.55
SALL3Q9BXA9 MIR3065-201ENST00000390137 79 ntBASIC5.4□□□□□ -1.55
SALL3Q9BXA9 RNU6-932P-201ENST00000391108 106 ntBASIC5.4□□□□□ -1.55
SALL3Q9BXA9 AL356317.1-201ENST00000396110 1436 ntBASIC5.4□□□□□ -1.55
SALL3Q9BXA9 RPS3AP23-201ENST00000401762 784 ntBASIC5.4□□□□□ -1.55
SALL3Q9BXA9 ATF1P1-201ENST00000406040 927 ntBASIC5.4□□□□□ -1.55
SALL3Q9BXA9 SNORA11-201ENST00000408789 128 ntBASIC5.4□□□□□ -1.55
SALL3Q9BXA9 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC5.4□□□□□ -1.55
SALL3Q9BXA9 ELOCP19-201ENST00000411919 318 ntBASIC5.4□□□□□ -1.55
SALL3Q9BXA9 XKRYP4-201ENST00000414395 483 ntBASIC5.4□□□□□ -1.55
SALL3Q9BXA9 RPS7P9-201ENST00000414704 586 ntBASIC5.4□□□□□ -1.55
SALL3Q9BXA9 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC5.4□□□□□ -1.55
SALL3Q9BXA9 AC119751.6-201ENST00000416712 186 ntBASIC5.4□□□□□ -1.55
SALL3Q9BXA9 MAP1LC3BP1-201ENST00000417653 379 ntBASIC5.4□□□□□ -1.55
SALL3Q9BXA9 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC5.4□□□□□ -1.55
SALL3Q9BXA9 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC5.4□□□□□ -1.55
SALL3Q9BXA9 RPS12P10-201ENST00000427031 377 ntBASIC5.4□□□□□ -1.55
SALL3Q9BXA9 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
SALL3Q9BXA9 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC5.4□□□□□ -1.55
SALL3Q9BXA9 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC5.4□□□□□ -1.55
SALL3Q9BXA9 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC5.4□□□□□ -1.55
SALL3Q9BXA9 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC5.4□□□□□ -1.55
SALL3Q9BXA9 XKRYP5-201ENST00000449659 483 ntBASIC5.4□□□□□ -1.55
SALL3Q9BXA9 RPL12P26-201ENST00000452430 487 ntBASIC5.4□□□□□ -1.55
SALL3Q9BXA9 NPM1P13-201ENST00000452663 865 ntBASIC5.4□□□□□ -1.55
SALL3Q9BXA9 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC5.4□□□□□ -1.55
SALL3Q9BXA9 AC079804.1-201ENST00000461922 436 ntBASIC5.4□□□□□ -1.55
SALL3Q9BXA9 AL672167.3-201ENST00000465951 960 ntBASIC5.4□□□□□ -1.55
SALL3Q9BXA9 RPL21P126-201ENST00000470049 478 ntBASIC5.4□□□□□ -1.55
SALL3Q9BXA9 MTND3P7-201ENST00000474435 343 ntBASIC5.4□□□□□ -1.55
SALL3Q9BXA9 RPL23AP44-201ENST00000482216 473 ntBASIC5.4□□□□□ -1.55
SALL3Q9BXA9 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.55
SALL3Q9BXA9 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC5.4□□□□□ -1.55
SALL3Q9BXA9 DDX18P4-201ENST00000511690 1966 ntBASIC5.4□□□□□ -1.55
SALL3Q9BXA9 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC5.4□□□□□ -1.55
SALL3Q9BXA9 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.4□□□□□ -1.55
SALL3Q9BXA9 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.4□□□□□ -1.55
SALL3Q9BXA9 OR5AN2P-201ENST00000534535 896 ntBASIC5.4□□□□□ -1.55
SALL3Q9BXA9 ERP27-202ENST00000540097 993 ntTSL 2 BASIC5.4□□□□□ -1.55
SALL3Q9BXA9 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC5.4□□□□□ -1.55
SALL3Q9BXA9 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.4□□□□□ -1.55
SALL3Q9BXA9 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC5.4□□□□□ -1.55
SALL3Q9BXA9 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC5.4□□□□□ -1.55
SALL3Q9BXA9 AC107021.2-201ENST00000567714 2095 ntBASIC5.4□□□□□ -1.55
SALL3Q9BXA9 AC022662.1-201ENST00000580252 331 ntBASIC5.4□□□□□ -1.55
SALL3Q9BXA9 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC5.4□□□□□ -1.55
SALL3Q9BXA9 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC5.4□□□□□ -1.55
SALL3Q9BXA9 AL590229.1-201ENST00000603497 542 ntBASIC5.4□□□□□ -1.55
SALL3Q9BXA9 AC107304.1-201ENST00000604229 296 ntBASIC5.4□□□□□ -1.55
SALL3Q9BXA9 AC239868.4-201ENST00000608318 671 ntBASIC5.4□□□□□ -1.55
SALL3Q9BXA9 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC5.4□□□□□ -1.55
SALL3Q9BXA9 AP000346.3-201ENST00000622821 210 ntBASIC5.4□□□□□ -1.55
SALL3Q9BXA9 AC006840.1-201ENST00000623069 542 ntBASIC5.4□□□□□ -1.55
SALL3Q9BXA9 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
SALL3Q9BXA9 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
SALL3Q9BXA9 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SALL3Q9BXA9 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SALL3Q9BXA9 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SALL3Q9BXA9 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.39□□□□□ -1.55
SALL3Q9BXA9 FAM133CP-201ENST00000332869 704 ntBASIC5.39□□□□□ -1.55
SALL3Q9BXA9 MIR192-201ENST00000384915 110 ntBASIC5.39□□□□□ -1.55
SALL3Q9BXA9 RNA5SP105-201ENST00000391123 113 ntBASIC5.39□□□□□ -1.55
SALL3Q9BXA9 RPS16P5-201ENST00000406501 404 ntBASIC5.39□□□□□ -1.55
SALL3Q9BXA9 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC5.39□□□□□ -1.55
SALL3Q9BXA9 SNRPFP1-201ENST00000414761 252 ntBASIC5.39□□□□□ -1.55
SALL3Q9BXA9 AMMECR1LP1-201ENST00000415152 841 ntBASIC5.39□□□□□ -1.55
SALL3Q9BXA9 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC5.39□□□□□ -1.55
SALL3Q9BXA9 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC5.39□□□□□ -1.55
SALL3Q9BXA9 CEACAMP9-201ENST00000442990 513 ntBASIC5.39□□□□□ -1.55
SALL3Q9BXA9 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC5.39□□□□□ -1.55
SALL3Q9BXA9 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC5.39□□□□□ -1.55
SALL3Q9BXA9 AC009220.1-201ENST00000451614 275 ntBASIC5.39□□□□□ -1.55
SALL3Q9BXA9 AC009963.2-201ENST00000453431 138 ntBASIC5.39□□□□□ -1.55
SALL3Q9BXA9 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC5.39□□□□□ -1.55
SALL3Q9BXA9 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC5.39□□□□□ -1.55
SALL3Q9BXA9 RPS27AP17-201ENST00000463344 455 ntBASIC5.39□□□□□ -1.55
SALL3Q9BXA9 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC5.39□□□□□ -1.55
SALL3Q9BXA9 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.39□□□□□ -1.55
SALL3Q9BXA9 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
SALL3Q9BXA9 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms