Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC5.41□□□□□ -1.54
CDK5RAP1Q96SZ6 PTMAP6-201ENST00000439110 327 ntBASIC5.41□□□□□ -1.54
CDK5RAP1Q96SZ6 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC5.41□□□□□ -1.54
CDK5RAP1Q96SZ6 AC090804.1-201ENST00000448870 490 ntBASIC5.41□□□□□ -1.54
CDK5RAP1Q96SZ6 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC5.41□□□□□ -1.54
CDK5RAP1Q96SZ6 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC5.41□□□□□ -1.54
CDK5RAP1Q96SZ6 RN7SL610P-201ENST00000463845 291 ntBASIC5.41□□□□□ -1.54
CDK5RAP1Q96SZ6 AC091959.2-201ENST00000477363 321 ntBASIC5.41□□□□□ -1.54
CDK5RAP1Q96SZ6 MTND6P6-201ENST00000478031 263 ntBASIC5.41□□□□□ -1.54
CDK5RAP1Q96SZ6 TMED11P-201ENST00000479478 690 ntBASIC5.41□□□□□ -1.54
CDK5RAP1Q96SZ6 RN7SL814P-201ENST00000487715 300 ntBASIC5.41□□□□□ -1.54
CDK5RAP1Q96SZ6 AC023424.2-201ENST00000493479 777 ntBASIC5.41□□□□□ -1.54
CDK5RAP1Q96SZ6 MTND5P5-201ENST00000503764 376 ntBASIC5.41□□□□□ -1.54
CDK5RAP1Q96SZ6 AC010587.2-201ENST00000511727 448 ntBASIC5.41□□□□□ -1.54
CDK5RAP1Q96SZ6 RNU6-875P-201ENST00000516488 106 ntBASIC5.41□□□□□ -1.54
CDK5RAP1Q96SZ6 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC5.41□□□□□ -1.54
CDK5RAP1Q96SZ6 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC5.41□□□□□ -1.54
CDK5RAP1Q96SZ6 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC5.41□□□□□ -1.54
CDK5RAP1Q96SZ6 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.41□□□□□ -1.54
CDK5RAP1Q96SZ6 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC5.41□□□□□ -1.54
CDK5RAP1Q96SZ6 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC5.41□□□□□ -1.54
CDK5RAP1Q96SZ6 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC5.41□□□□□ -1.54
CDK5RAP1Q96SZ6 MTCO3P13-201ENST00000577757 781 ntBASIC5.41□□□□□ -1.54
CDK5RAP1Q96SZ6 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC5.41□□□□□ -1.54
CDK5RAP1Q96SZ6 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC5.41□□□□□ -1.54
CDK5RAP1Q96SZ6 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.41□□□□□ -1.54
CDK5RAP1Q96SZ6 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.41□□□□□ -1.54
CDK5RAP1Q96SZ6 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.41□□□□□ -1.54
CDK5RAP1Q96SZ6 AP001836.1-201ENST00000604675 523 ntBASIC5.41□□□□□ -1.54
CDK5RAP1Q96SZ6 AC011626.1-201ENST00000604710 562 ntBASIC5.41□□□□□ -1.54
CDK5RAP1Q96SZ6 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CDK5RAP1Q96SZ6 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
CDK5RAP1Q96SZ6 MIR6839-201ENST00000620425 113 ntBASIC5.41□□□□□ -1.54
CDK5RAP1Q96SZ6 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.41□□□□□ -1.54
CDK5RAP1Q96SZ6 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.41□□□□□ -1.54
CDK5RAP1Q96SZ6 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.41□□□□□ -1.54
CDK5RAP1Q96SZ6 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
CDK5RAP1Q96SZ6 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
CDK5RAP1Q96SZ6 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
CDK5RAP1Q96SZ6 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC5.41□□□□□ -1.54
CDK5RAP1Q96SZ6 AC017104.4-201ENST00000636283 1592 ntBASIC5.41□□□□□ -1.54
CDK5RAP1Q96SZ6 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC5.41□□□□□ -1.54
CDK5RAP1Q96SZ6 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CDK5RAP1Q96SZ6 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.41□□□□□ -1.54
CDK5RAP1Q96SZ6 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
CDK5RAP1Q96SZ6 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
CDK5RAP1Q96SZ6 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.4□□□□□ -1.54
CDK5RAP1Q96SZ6 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
CDK5RAP1Q96SZ6 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.4□□□□□ -1.54
CDK5RAP1Q96SZ6 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.4□□□□□ -1.54
CDK5RAP1Q96SZ6 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.4□□□□□ -1.54
CDK5RAP1Q96SZ6 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.4□□□□□ -1.54
CDK5RAP1Q96SZ6 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC5.4□□□□□ -1.54
CDK5RAP1Q96SZ6 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CDK5RAP1Q96SZ6 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CDK5RAP1Q96SZ6 MTND5P26-201ENST00000426018 1752 ntBASIC5.4□□□□□ -1.54
CDK5RAP1Q96SZ6 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
CDK5RAP1Q96SZ6 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
CDK5RAP1Q96SZ6 RNU6-931P-201ENST00000363850 107 ntBASIC5.4□□□□□ -1.54
CDK5RAP1Q96SZ6 RN7SKP113-201ENST00000363891 295 ntBASIC5.4□□□□□ -1.54
CDK5RAP1Q96SZ6 OR1L6-202ENST00000373684 1044 ntBASIC5.4□□□□□ -1.54
CDK5RAP1Q96SZ6 OR1L1-202ENST00000373686 1083 ntBASIC5.4□□□□□ -1.54
CDK5RAP1Q96SZ6 AL672167.2-201ENST00000377164 879 ntBASIC5.4□□□□□ -1.54
CDK5RAP1Q96SZ6 RNU1-106P-201ENST00000384382 164 ntBASIC5.4□□□□□ -1.54
CDK5RAP1Q96SZ6 RNA5SP241-201ENST00000391326 114 ntBASIC5.4□□□□□ -1.54
CDK5RAP1Q96SZ6 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CDK5RAP1Q96SZ6 ARL4AP5-201ENST00000404372 599 ntBASIC5.4□□□□□ -1.54
CDK5RAP1Q96SZ6 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.4□□□□□ -1.54
CDK5RAP1Q96SZ6 AC093162.1-201ENST00000419682 124 ntBASIC5.4□□□□□ -1.54
CDK5RAP1Q96SZ6 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC5.4□□□□□ -1.54
CDK5RAP1Q96SZ6 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC5.4□□□□□ -1.54
CDK5RAP1Q96SZ6 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC5.4□□□□□ -1.54
CDK5RAP1Q96SZ6 RAB9AP5-201ENST00000437794 597 ntBASIC5.4□□□□□ -1.54
CDK5RAP1Q96SZ6 DNAJC19P4-201ENST00000440115 345 ntBASIC5.4□□□□□ -1.54
CDK5RAP1Q96SZ6 MTND5P14-201ENST00000441481 1267 ntBASIC5.4□□□□□ -1.54
CDK5RAP1Q96SZ6 AC112653.1-201ENST00000443851 386 ntBASIC5.4□□□□□ -1.54
CDK5RAP1Q96SZ6 RAB9AP2-201ENST00000443911 597 ntBASIC5.4□□□□□ -1.54
CDK5RAP1Q96SZ6 MED28P3-201ENST00000444288 531 ntBASIC5.4□□□□□ -1.54
CDK5RAP1Q96SZ6 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC5.4□□□□□ -1.54
CDK5RAP1Q96SZ6 NOP56P2-201ENST00000447491 769 ntBASIC5.4□□□□□ -1.54
CDK5RAP1Q96SZ6 AL050341.1-201ENST00000447743 313 ntBASIC5.4□□□□□ -1.54
CDK5RAP1Q96SZ6 Z99127.3-201ENST00000448158 395 ntBASIC5.4□□□□□ -1.54
CDK5RAP1Q96SZ6 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC5.4□□□□□ -1.54
CDK5RAP1Q96SZ6 CDC42P1-201ENST00000456658 548 ntBASIC5.4□□□□□ -1.54
CDK5RAP1Q96SZ6 AC004453.1-201ENST00000487895 408 ntBASIC5.4□□□□□ -1.54
CDK5RAP1Q96SZ6 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC5.4□□□□□ -1.54
CDK5RAP1Q96SZ6 AC097173.1-201ENST00000505862 819 ntBASIC5.4□□□□□ -1.54
CDK5RAP1Q96SZ6 IMPA1P1-201ENST00000510718 842 ntBASIC5.4□□□□□ -1.54
CDK5RAP1Q96SZ6 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC5.4□□□□□ -1.54
CDK5RAP1Q96SZ6 AC092709.1-201ENST00000521355 1045 ntBASIC5.4□□□□□ -1.54
CDK5RAP1Q96SZ6 SMARCE1P4-201ENST00000523647 241 ntBASIC5.4□□□□□ -1.54
CDK5RAP1Q96SZ6 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC5.4□□□□□ -1.54
CDK5RAP1Q96SZ6 DEFB108A-201ENST00000530110 222 ntBASIC5.4□□□□□ -1.54
CDK5RAP1Q96SZ6 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CDK5RAP1Q96SZ6 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC5.4□□□□□ -1.54
CDK5RAP1Q96SZ6 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC5.4□□□□□ -1.54
CDK5RAP1Q96SZ6 AC125612.1-201ENST00000547580 377 ntBASIC5.4□□□□□ -1.54
CDK5RAP1Q96SZ6 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC5.4□□□□□ -1.54
CDK5RAP1Q96SZ6 EIF5A2P1-201ENST00000564027 460 ntBASIC5.4□□□□□ -1.54
CDK5RAP1Q96SZ6 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 175.1 ms