Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.41□□□□□ -1.54
VPS11Q9H270 OR5H6-203ENST00000642105 978 ntBASIC5.41□□□□□ -1.54
VPS11Q9H270 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
VPS11Q9H270 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
VPS11Q9H270 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
VPS11Q9H270 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
VPS11Q9H270 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
VPS11Q9H270 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC5.41□□□□□ -1.54
VPS11Q9H270 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.4□□□□□ -1.54
VPS11Q9H270 AC106872.5-201ENST00000508856 1416 ntBASIC5.4□□□□□ -1.54
VPS11Q9H270 AC114786.1-201ENST00000512892 1415 ntBASIC5.4□□□□□ -1.54
VPS11Q9H270 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.4□□□□□ -1.54
VPS11Q9H270 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
VPS11Q9H270 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
VPS11Q9H270 NACA3P-201ENST00000359690 648 ntBASIC5.4□□□□□ -1.54
VPS11Q9H270 RNA5SP394-201ENST00000364216 119 ntBASIC5.4□□□□□ -1.54
VPS11Q9H270 RN7SKP6-201ENST00000364795 319 ntBASIC5.4□□□□□ -1.54
VPS11Q9H270 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
VPS11Q9H270 Y_RNA.535-201ENST00000384612 99 ntBASIC5.4□□□□□ -1.54
VPS11Q9H270 MIR16-1-201ENST00000385271 89 ntBASIC5.4□□□□□ -1.54
VPS11Q9H270 SNORD115-47-201ENST00000391226 86 ntBASIC5.4□□□□□ -1.54
VPS11Q9H270 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
VPS11Q9H270 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC5.4□□□□□ -1.54
VPS11Q9H270 OR4K6P-201ENST00000416478 897 ntBASIC5.4□□□□□ -1.54
VPS11Q9H270 UBTFL3-201ENST00000418934 1024 ntBASIC5.4□□□□□ -1.54
VPS11Q9H270 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC5.4□□□□□ -1.54
VPS11Q9H270 AC004448.2-201ENST00000422360 586 ntBASIC5.4□□□□□ -1.54
VPS11Q9H270 AKR1B10P1-201ENST00000425765 942 ntBASIC5.4□□□□□ -1.54
VPS11Q9H270 AL353597.2-202ENST00000434901 373 ntBASIC5.4□□□□□ -1.54
VPS11Q9H270 DNAJC19P4-201ENST00000440115 345 ntBASIC5.4□□□□□ -1.54
VPS11Q9H270 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC5.4□□□□□ -1.54
VPS11Q9H270 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC5.4□□□□□ -1.54
VPS11Q9H270 USP9YP8-201ENST00000441913 500 ntBASIC5.4□□□□□ -1.54
VPS11Q9H270 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC5.4□□□□□ -1.54
VPS11Q9H270 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC5.4□□□□□ -1.54
VPS11Q9H270 CYCSP24-201ENST00000445119 316 ntBASIC5.4□□□□□ -1.54
VPS11Q9H270 OR52E7P-201ENST00000452394 933 ntBASIC5.4□□□□□ -1.54
VPS11Q9H270 HLA-DPA3-207ENST00000454398 229 ntBASIC5.4□□□□□ -1.54
VPS11Q9H270 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC5.4□□□□□ -1.54
VPS11Q9H270 AC015724.1-201ENST00000478577 156 ntBASIC5.4□□□□□ -1.54
VPS11Q9H270 AP002884.1-201ENST00000479691 655 ntBASIC5.4□□□□□ -1.54
VPS11Q9H270 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC5.4□□□□□ -1.54
VPS11Q9H270 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC5.4□□□□□ -1.54
VPS11Q9H270 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC5.4□□□□□ -1.54
VPS11Q9H270 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC5.4□□□□□ -1.54
VPS11Q9H270 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC5.4□□□□□ -1.54
VPS11Q9H270 AC046134.1-201ENST00000514454 666 ntBASIC5.4□□□□□ -1.54
VPS11Q9H270 RNU6-506P-201ENST00000516553 94 ntBASIC5.4□□□□□ -1.54
VPS11Q9H270 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC5.4□□□□□ -1.54
VPS11Q9H270 AC060775.1-201ENST00000518241 520 ntBASIC5.4□□□□□ -1.54
VPS11Q9H270 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC5.4□□□□□ -1.54
VPS11Q9H270 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC5.4□□□□□ -1.54
VPS11Q9H270 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC5.4□□□□□ -1.54
VPS11Q9H270 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC5.4□□□□□ -1.54
VPS11Q9H270 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC5.4□□□□□ -1.54
VPS11Q9H270 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC5.4□□□□□ -1.54
VPS11Q9H270 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC5.4□□□□□ -1.54
VPS11Q9H270 EIF5A2P1-201ENST00000564027 460 ntBASIC5.4□□□□□ -1.54
VPS11Q9H270 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
VPS11Q9H270 BPTFP1-201ENST00000579209 492 ntBASIC5.4□□□□□ -1.54
VPS11Q9H270 AC006539.2-201ENST00000601729 572 ntBASIC5.4□□□□□ -1.54
VPS11Q9H270 AC018714.1-201ENST00000605028 208 ntBASIC5.4□□□□□ -1.54
VPS11Q9H270 MIR6839-201ENST00000620425 113 ntBASIC5.4□□□□□ -1.54
VPS11Q9H270 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
VPS11Q9H270 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
VPS11Q9H270 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.4□□□□□ -1.55
VPS11Q9H270 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
VPS11Q9H270 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.55
VPS11Q9H270 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.4□□□□□ -1.55
VPS11Q9H270 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
VPS11Q9H270 AC025574.1-201ENST00000554784 1653 ntBASIC5.4□□□□□ -1.55
VPS11Q9H270 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC5.4□□□□□ -1.55
VPS11Q9H270 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
VPS11Q9H270 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.39□□□□□ -1.55
VPS11Q9H270 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
VPS11Q9H270 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
VPS11Q9H270 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
VPS11Q9H270 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.39□□□□□ -1.55
VPS11Q9H270 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.39□□□□□ -1.55
VPS11Q9H270 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.39□□□□□ -1.55
VPS11Q9H270 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
VPS11Q9H270 AC091305.2-201ENST00000624049 1576 ntBASIC5.39□□□□□ -1.55
VPS11Q9H270 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.39□□□□□ -1.55
VPS11Q9H270 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
VPS11Q9H270 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
VPS11Q9H270 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
VPS11Q9H270 MIR375-201ENST00000362103 64 ntBASIC5.39□□□□□ -1.55
VPS11Q9H270 RNU4-44P-201ENST00000363050 141 ntBASIC5.39□□□□□ -1.55
VPS11Q9H270 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
VPS11Q9H270 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
VPS11Q9H270 Y_RNA.465-201ENST00000384293 102 ntBASIC5.39□□□□□ -1.55
VPS11Q9H270 FGF7P8-201ENST00000402994 292 ntBASIC5.39□□□□□ -1.55
VPS11Q9H270 TPMTP3-201ENST00000411928 735 ntBASIC5.39□□□□□ -1.55
VPS11Q9H270 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
VPS11Q9H270 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC5.39□□□□□ -1.55
VPS11Q9H270 OR6D1P-201ENST00000436165 939 ntBASIC5.39□□□□□ -1.55
VPS11Q9H270 AC007327.1-201ENST00000447461 264 ntBASIC5.39□□□□□ -1.55
VPS11Q9H270 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.39□□□□□ -1.55
VPS11Q9H270 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
VPS11Q9H270 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 252.9 ms