Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
SNED1Q8TER0 MTCO1P12-201ENST00000414273 1543 ntBASIC4.74□□□□□ -1.65
SNED1Q8TER0 Y_RNA.62-201ENST00000362840 99 ntBASIC4.74□□□□□ -1.65
SNED1Q8TER0 RNA5SP267-201ENST00000364893 126 ntBASIC4.74□□□□□ -1.65
SNED1Q8TER0 RNA5SP97-201ENST00000365006 84 ntBASIC4.74□□□□□ -1.65
SNED1Q8TER0 RPL7P60-201ENST00000397636 735 ntBASIC4.74□□□□□ -1.65
SNED1Q8TER0 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SNED1Q8TER0 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SNED1Q8TER0 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC4.74□□□□□ -1.65
SNED1Q8TER0 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SNED1Q8TER0 DYNLL1P7-201ENST00000429273 258 ntBASIC4.74□□□□□ -1.65
SNED1Q8TER0 CYCSP4-201ENST00000429682 331 ntBASIC4.74□□□□□ -1.65
SNED1Q8TER0 UBE2V1P6-201ENST00000430840 422 ntBASIC4.74□□□□□ -1.65
SNED1Q8TER0 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SNED1Q8TER0 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC4.74□□□□□ -1.65
SNED1Q8TER0 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC4.74□□□□□ -1.65
SNED1Q8TER0 ZNF736P6Y-201ENST00000447526 1213 ntBASIC4.74□□□□□ -1.65
SNED1Q8TER0 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SNED1Q8TER0 AC104978.1-201ENST00000449387 391 ntBASIC4.74□□□□□ -1.65
SNED1Q8TER0 SUN3-208ENST00000453192 801 ntTSL 5 BASIC4.74□□□□□ -1.65
SNED1Q8TER0 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.74□□□□□ -1.65
SNED1Q8TER0 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.74□□□□□ -1.65
SNED1Q8TER0 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC4.74□□□□□ -1.65
SNED1Q8TER0 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4.74□□□□□ -1.65
SNED1Q8TER0 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.74□□□□□ -1.65
SNED1Q8TER0 AC119751.5-201ENST00000514077 770 ntBASIC4.74□□□□□ -1.65
SNED1Q8TER0 AC016550.3-201ENST00000515706 767 ntBASIC4.74□□□□□ -1.65
SNED1Q8TER0 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC4.74□□□□□ -1.65
SNED1Q8TER0 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC4.74□□□□□ -1.65
SNED1Q8TER0 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SNED1Q8TER0 AP003049.1-201ENST00000529418 457 ntBASIC4.74□□□□□ -1.65
SNED1Q8TER0 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.74□□□□□ -1.65
SNED1Q8TER0 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.74□□□□□ -1.65
SNED1Q8TER0 AC037471.2-201ENST00000564941 598 ntBASIC4.74□□□□□ -1.65
SNED1Q8TER0 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.74□□□□□ -1.65
SNED1Q8TER0 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC4.74□□□□□ -1.65
SNED1Q8TER0 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC4.74□□□□□ -1.65
SNED1Q8TER0 AC027449.1-201ENST00000608890 407 ntBASIC4.74□□□□□ -1.65
SNED1Q8TER0 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC4.74□□□□□ -1.65
SNED1Q8TER0 AL050303.3-201ENST00000613704 284 ntBASIC4.74□□□□□ -1.65
SNED1Q8TER0 AL512506.1-201ENST00000613918 449 ntBASIC4.74□□□□□ -1.65
SNED1Q8TER0 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC4.74□□□□□ -1.65
SNED1Q8TER0 TCP1P3-201ENST00000414406 1498 ntBASIC4.74□□□□□ -1.65
SNED1Q8TER0 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SNED1Q8TER0 DDX18P4-201ENST00000511690 1966 ntBASIC4.74□□□□□ -1.65
SNED1Q8TER0 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
SNED1Q8TER0 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC4.73□□□□□ -1.65
SNED1Q8TER0 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.73□□□□□ -1.65
SNED1Q8TER0 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.73□□□□□ -1.65
SNED1Q8TER0 OR52E6-202ENST00000379946 954 ntBASIC4.73□□□□□ -1.65
SNED1Q8TER0 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SNED1Q8TER0 VDAC2P1-201ENST00000399358 958 ntBASIC4.73□□□□□ -1.65
SNED1Q8TER0 Z92545.1-201ENST00000411782 234 ntBASIC4.73□□□□□ -1.65
SNED1Q8TER0 ZNF736P2Y-201ENST00000416040 1279 ntBASIC4.73□□□□□ -1.65
SNED1Q8TER0 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.73□□□□□ -1.65
SNED1Q8TER0 FCF1P6-201ENST00000456841 595 ntBASIC4.73□□□□□ -1.65
SNED1Q8TER0 OR9N1P-201ENST00000491296 333 ntBASIC4.73□□□□□ -1.65
SNED1Q8TER0 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC4.73□□□□□ -1.65
SNED1Q8TER0 OR8X1P-201ENST00000534542 869 ntBASIC4.73□□□□□ -1.65
SNED1Q8TER0 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC4.73□□□□□ -1.65
SNED1Q8TER0 AC068993.1-201ENST00000546724 589 ntBASIC4.73□□□□□ -1.65
SNED1Q8TER0 AC107016.1-201ENST00000550463 337 ntBASIC4.73□□□□□ -1.65
SNED1Q8TER0 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC4.73□□□□□ -1.65
SNED1Q8TER0 AC020914.6-201ENST00000594327 272 ntBASIC4.73□□□□□ -1.65
SNED1Q8TER0 AL451044.1-201ENST00000604867 238 ntBASIC4.73□□□□□ -1.65
SNED1Q8TER0 MARK2P15-201ENST00000432204 2186 ntBASIC4.73□□□□□ -1.65
SNED1Q8TER0 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SNED1Q8TER0 MTND4P21-201ENST00000453886 1357 ntBASIC4.73□□□□□ -1.65
SNED1Q8TER0 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.73□□□□□ -1.65
SNED1Q8TER0 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.73□□□□□ -1.65
SNED1Q8TER0 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SNED1Q8TER0 HSPA8P19-201ENST00000505359 1517 ntBASIC4.73□□□□□ -1.65
SNED1Q8TER0 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SNED1Q8TER0 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SNED1Q8TER0 AP002001.2-201ENST00000529025 1469 ntBASIC4.73□□□□□ -1.65
SNED1Q8TER0 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
SNED1Q8TER0 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC4.72□□□□□ -1.65
SNED1Q8TER0 ZNF602P-201ENST00000405929 924 ntBASIC4.72□□□□□ -1.65
SNED1Q8TER0 RNU2-65P-201ENST00000410162 185 ntBASIC4.72□□□□□ -1.65
SNED1Q8TER0 AL117351.1-201ENST00000438864 766 ntBASIC4.72□□□□□ -1.65
SNED1Q8TER0 CYCSP32-201ENST00000440548 321 ntBASIC4.72□□□□□ -1.65
SNED1Q8TER0 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC4.72□□□□□ -1.65
SNED1Q8TER0 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.72□□□□□ -1.65
SNED1Q8TER0 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC4.72□□□□□ -1.65
SNED1Q8TER0 RPS4XP10-201ENST00000465034 731 ntBASIC4.72□□□□□ -1.65
SNED1Q8TER0 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC4.72□□□□□ -1.65
SNED1Q8TER0 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4.72□□□□□ -1.65
SNED1Q8TER0 GMPSP1-201ENST00000514075 579 ntBASIC4.72□□□□□ -1.65
SNED1Q8TER0 AP003102.1-201ENST00000525638 661 ntBASIC4.72□□□□□ -1.65
SNED1Q8TER0 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC4.72□□□□□ -1.65
SNED1Q8TER0 OR1AB1P-201ENST00000585564 761 ntBASIC4.72□□□□□ -1.65
SNED1Q8TER0 AC096947.1-201ENST00000603233 470 ntBASIC4.72□□□□□ -1.65
SNED1Q8TER0 BNIP3P31-201ENST00000604515 566 ntBASIC4.72□□□□□ -1.65
SNED1Q8TER0 AC005000.2-201ENST00000605468 310 ntBASIC4.72□□□□□ -1.65
SNED1Q8TER0 AL122125.1-201ENST00000616999 600 ntBASIC4.72□□□□□ -1.65
SNED1Q8TER0 AC009039.2-201ENST00000624524 529 ntBASIC4.72□□□□□ -1.65
SNED1Q8TER0 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC4.72□□□□□ -1.65
SNED1Q8TER0 AC055839.1-201ENST00000634467 498 ntBASIC4.72□□□□□ -1.65
SNED1Q8TER0 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
SNED1Q8TER0 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms