Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 RN7SKP149-201ENST00000363008 344 ntBASIC4.21□□□□□ -1.74
CLPTM1O96005 RN7SKP103-201ENST00000363848 320 ntBASIC4.21□□□□□ -1.74
CLPTM1O96005 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.21□□□□□ -1.74
CLPTM1O96005 RNU6-906P-201ENST00000384700 70 ntBASIC4.21□□□□□ -1.74
CLPTM1O96005 RNU6-932P-201ENST00000391108 106 ntBASIC4.21□□□□□ -1.74
CLPTM1O96005 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CLPTM1O96005 FCF1P5-201ENST00000406490 482 ntBASIC4.21□□□□□ -1.74
CLPTM1O96005 GTF2IP5-201ENST00000414608 731 ntBASIC4.21□□□□□ -1.74
CLPTM1O96005 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC4.21□□□□□ -1.74
CLPTM1O96005 AC062016.2-201ENST00000420950 676 ntBASIC4.21□□□□□ -1.74
CLPTM1O96005 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC4.21□□□□□ -1.74
CLPTM1O96005 MTCO3P21-201ENST00000430791 643 ntBASIC4.21□□□□□ -1.74
CLPTM1O96005 AL035246.1-201ENST00000433554 1255 ntBASIC4.21□□□□□ -1.74
CLPTM1O96005 RPL7P28-201ENST00000437739 740 ntBASIC4.21□□□□□ -1.74
CLPTM1O96005 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC4.21□□□□□ -1.74
CLPTM1O96005 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.74
CLPTM1O96005 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.21□□□□□ -1.74
CLPTM1O96005 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC4.21□□□□□ -1.74
CLPTM1O96005 OR52J1P-201ENST00000450596 932 ntBASIC4.21□□□□□ -1.74
CLPTM1O96005 AC092155.2-201ENST00000454675 477 ntBASIC4.21□□□□□ -1.74
CLPTM1O96005 RPL21P71-201ENST00000465598 459 ntBASIC4.21□□□□□ -1.74
CLPTM1O96005 AC083982.1-201ENST00000485679 344 ntBASIC4.21□□□□□ -1.74
CLPTM1O96005 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CLPTM1O96005 AC010627.1-201ENST00000503819 1294 ntBASIC4.21□□□□□ -1.74
CLPTM1O96005 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC4.21□□□□□ -1.74
CLPTM1O96005 AC017037.1-201ENST00000508460 471 ntBASIC4.21□□□□□ -1.74
CLPTM1O96005 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC4.21□□□□□ -1.74
CLPTM1O96005 RNU6-347P-201ENST00000516658 105 ntBASIC4.21□□□□□ -1.74
CLPTM1O96005 RNU6-1028P-201ENST00000517164 93 ntBASIC4.21□□□□□ -1.74
CLPTM1O96005 IGHV3-32-201ENST00000519182 355 ntBASIC4.21□□□□□ -1.74
CLPTM1O96005 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC4.21□□□□□ -1.74
CLPTM1O96005 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC4.21□□□□□ -1.74
CLPTM1O96005 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.21□□□□□ -1.74
CLPTM1O96005 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC4.21□□□□□ -1.74
CLPTM1O96005 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC4.21□□□□□ -1.74
CLPTM1O96005 AC009117.1-201ENST00000563948 554 ntBASIC4.21□□□□□ -1.74
CLPTM1O96005 AC110743.1-201ENST00000584870 478 ntBASIC4.21□□□□□ -1.74
CLPTM1O96005 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.21□□□□□ -1.74
CLPTM1O96005 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.21□□□□□ -1.74
CLPTM1O96005 AC020910.3-201ENST00000603701 874 ntBASIC4.21□□□□□ -1.74
CLPTM1O96005 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC4.21□□□□□ -1.74
CLPTM1O96005 FAM25E-202ENST00000608562 189 ntBASIC4.21□□□□□ -1.74
CLPTM1O96005 OR2BH1P-201ENST00000608850 864 ntBASIC4.21□□□□□ -1.74
CLPTM1O96005 AC096586.1-201ENST00000610267 561 ntBASIC4.21□□□□□ -1.74
CLPTM1O96005 PART1_2.1-201ENST00000612397 250 ntBASIC4.21□□□□□ -1.74
CLPTM1O96005 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC4.21□□□□□ -1.74
CLPTM1O96005 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC4.21□□□□□ -1.74
CLPTM1O96005 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
CLPTM1O96005 CCT8P1-201ENST00000413611 1657 ntBASIC4.21□□□□□ -1.74
CLPTM1O96005 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CLPTM1O96005 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
CLPTM1O96005 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CLPTM1O96005 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.21□□□□□ -1.74
CLPTM1O96005 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
CLPTM1O96005 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
CLPTM1O96005 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
CLPTM1O96005 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.2□□□□□ -1.74
CLPTM1O96005 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.2□□□□□ -1.74
CLPTM1O96005 FAM35DP-201ENST00000323387 2712 ntBASIC4.2□□□□□ -1.74
CLPTM1O96005 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.2□□□□□ -1.74
CLPTM1O96005 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CLPTM1O96005 AC095050.2-201ENST00000510748 1458 ntBASIC4.2□□□□□ -1.74
CLPTM1O96005 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
CLPTM1O96005 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.2□□□□□ -1.74
CLPTM1O96005 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CLPTM1O96005 RNA5SP191-201ENST00000362585 102 ntBASIC4.2□□□□□ -1.74
CLPTM1O96005 RNU6-666P-201ENST00000363499 107 ntBASIC4.2□□□□□ -1.74
CLPTM1O96005 RNU1-63P-201ENST00000383902 164 ntBASIC4.2□□□□□ -1.74
CLPTM1O96005 RNU6-185P-201ENST00000384421 107 ntBASIC4.2□□□□□ -1.74
CLPTM1O96005 SNORD65C-201ENST00000390962 71 ntBASIC4.2□□□□□ -1.74
CLPTM1O96005 RPL7P27-201ENST00000403775 720 ntBASIC4.2□□□□□ -1.74
CLPTM1O96005 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC4.2□□□□□ -1.74
CLPTM1O96005 AC013404.1-201ENST00000413068 249 ntBASIC4.2□□□□□ -1.74
CLPTM1O96005 VTA1P1-201ENST00000414044 866 ntBASIC4.2□□□□□ -1.74
CLPTM1O96005 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC4.2□□□□□ -1.74
CLPTM1O96005 AC246680.2-201ENST00000422106 389 ntBASIC4.2□□□□□ -1.74
CLPTM1O96005 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.2□□□□□ -1.74
CLPTM1O96005 AC092447.3-201ENST00000426027 686 ntBASIC4.2□□□□□ -1.74
CLPTM1O96005 FTH1P6-201ENST00000430768 320 ntBASIC4.2□□□□□ -1.74
CLPTM1O96005 CDY14P-201ENST00000431260 1014 ntBASIC4.2□□□□□ -1.74
CLPTM1O96005 AC008072.1-201ENST00000434254 824 ntBASIC4.2□□□□□ -1.74
CLPTM1O96005 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC4.2□□□□□ -1.74
CLPTM1O96005 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.2□□□□□ -1.74
CLPTM1O96005 CDY12P-201ENST00000440679 1015 ntBASIC4.2□□□□□ -1.74
CLPTM1O96005 CDY13P-201ENST00000445813 1015 ntBASIC4.2□□□□□ -1.74
CLPTM1O96005 SEPT14P24-201ENST00000447236 180 ntBASIC4.2□□□□□ -1.74
CLPTM1O96005 OR51B8P-201ENST00000449892 769 ntBASIC4.2□□□□□ -1.74
CLPTM1O96005 AC239809.1-201ENST00000450470 217 ntBASIC4.2□□□□□ -1.74
CLPTM1O96005 AC010733.1-201ENST00000451515 401 ntBASIC4.2□□□□□ -1.74
CLPTM1O96005 CDY23P-201ENST00000451661 1014 ntBASIC4.2□□□□□ -1.74
CLPTM1O96005 EIF4A2P4-201ENST00000458691 1196 ntBASIC4.2□□□□□ -1.74
CLPTM1O96005 AC063943.1-201ENST00000465434 453 ntBASIC4.2□□□□□ -1.74
CLPTM1O96005 AC020898.1-201ENST00000474167 787 ntBASIC4.2□□□□□ -1.74
CLPTM1O96005 AC025164.1-201ENST00000496249 478 ntBASIC4.2□□□□□ -1.74
CLPTM1O96005 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.2□□□□□ -1.74
CLPTM1O96005 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CLPTM1O96005 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.2□□□□□ -1.74
CLPTM1O96005 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC4.2□□□□□ -1.74
CLPTM1O96005 GAPDHP56-201ENST00000506031 988 ntBASIC4.2□□□□□ -1.74
CLPTM1O96005 MIR2114-201ENST00000516645 80 ntBASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 125.5 ms