Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
H2afb1S4R1E0 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
H2afb1S4R1E0 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
H2afb1S4R1E0 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
H2afb1S4R1E0 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
H2afb1S4R1E0 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
H2afb1S4R1E0 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
H2afb1S4R1E0 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
H2afb1S4R1E0 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
H2afb1S4R1E0 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
H2afb1S4R1E0 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
H2afb1S4R1E0 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
H2afb1S4R1E0 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
H2afb1S4R1E0 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
H2afb1S4R1E0 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
H2afb1S4R1E0 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
H2afb1S4R1E0 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
H2afb1S4R1E0 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
H2afb1S4R1E0 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC15.01□□□□□ -0.01
H2afb1S4R1E0 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
H2afb1S4R1E0 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
H2afb1S4R1E0 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
H2afb1S4R1E0 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
H2afb1S4R1E0 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
H2afb1S4R1E0 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
H2afb1S4R1E0 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
H2afb1S4R1E0 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
H2afb1S4R1E0 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC15.01□□□□□ -0.01
H2afb1S4R1E0 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
H2afb1S4R1E0 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
H2afb1S4R1E0 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
H2afb1S4R1E0 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
H2afb1S4R1E0 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
H2afb1S4R1E0 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
H2afb1S4R1E0 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
H2afb1S4R1E0 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC15□□□□□ -0.01
H2afb1S4R1E0 Gm9731-201ENSMUST00000209480 747 ntBASIC15□□□□□ -0.01
H2afb1S4R1E0 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
H2afb1S4R1E0 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
H2afb1S4R1E0 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
H2afb1S4R1E0 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
H2afb1S4R1E0 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC15□□□□□ -0.01
H2afb1S4R1E0 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
H2afb1S4R1E0 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC15□□□□□ -0.01
H2afb1S4R1E0 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
H2afb1S4R1E0 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
H2afb1S4R1E0 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC15□□□□□ -0.01
H2afb1S4R1E0 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC15□□□□□ -0.01
H2afb1S4R1E0 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
H2afb1S4R1E0 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
H2afb1S4R1E0 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
H2afb1S4R1E0 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
H2afb1S4R1E0 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
H2afb1S4R1E0 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
H2afb1S4R1E0 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
H2afb1S4R1E0 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
H2afb1S4R1E0 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
H2afb1S4R1E0 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
H2afb1S4R1E0 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
H2afb1S4R1E0 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
H2afb1S4R1E0 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC14.99□□□□□ -0.01
H2afb1S4R1E0 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
H2afb1S4R1E0 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
H2afb1S4R1E0 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
H2afb1S4R1E0 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
H2afb1S4R1E0 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC14.99□□□□□ -0.01
H2afb1S4R1E0 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
H2afb1S4R1E0 Gm20760-201ENSMUST00000179197 648 ntBASIC14.99□□□□□ -0.01
H2afb1S4R1E0 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
H2afb1S4R1E0 Gm10698-201ENSMUST00000182663 604 ntBASIC14.99□□□□□ -0.01
H2afb1S4R1E0 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
H2afb1S4R1E0 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
H2afb1S4R1E0 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
H2afb1S4R1E0 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
H2afb1S4R1E0 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
H2afb1S4R1E0 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
H2afb1S4R1E0 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
H2afb1S4R1E0 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC14.99□□□□□ -0.01
H2afb1S4R1E0 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
H2afb1S4R1E0 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
H2afb1S4R1E0 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
H2afb1S4R1E0 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
H2afb1S4R1E0 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
H2afb1S4R1E0 Ptprs-211ENSMUST00000223859 5588 ntBASIC14.99□□□□□ -0.01
H2afb1S4R1E0 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
H2afb1S4R1E0 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
H2afb1S4R1E0 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
H2afb1S4R1E0 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
H2afb1S4R1E0 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
H2afb1S4R1E0 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
H2afb1S4R1E0 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
H2afb1S4R1E0 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
H2afb1S4R1E0 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC14.98□□□□□ -0.01
H2afb1S4R1E0 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
H2afb1S4R1E0 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
H2afb1S4R1E0 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
H2afb1S4R1E0 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
H2afb1S4R1E0 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
H2afb1S4R1E0 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
H2afb1S4R1E0 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms