Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ClcnkaQ9WUB7 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
ClcnkaQ9WUB7 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
ClcnkaQ9WUB7 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
ClcnkaQ9WUB7 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
ClcnkaQ9WUB7 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
ClcnkaQ9WUB7 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
ClcnkaQ9WUB7 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
ClcnkaQ9WUB7 Gm6433-201ENSMUST00000118634 875 ntBASIC15.23■□□□□ 0.03
ClcnkaQ9WUB7 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
ClcnkaQ9WUB7 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
ClcnkaQ9WUB7 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC15.23■□□□□ 0.03
ClcnkaQ9WUB7 Gm18959-201ENSMUST00000208954 655 ntBASIC15.23■□□□□ 0.03
ClcnkaQ9WUB7 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
ClcnkaQ9WUB7 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ClcnkaQ9WUB7 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
ClcnkaQ9WUB7 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
ClcnkaQ9WUB7 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
ClcnkaQ9WUB7 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
ClcnkaQ9WUB7 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ClcnkaQ9WUB7 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
ClcnkaQ9WUB7 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
ClcnkaQ9WUB7 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC15.23■□□□□ 0.03
ClcnkaQ9WUB7 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ClcnkaQ9WUB7 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ClcnkaQ9WUB7 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ClcnkaQ9WUB7 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ClcnkaQ9WUB7 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC15.22■□□□□ 0.03
ClcnkaQ9WUB7 Spsb2-203ENSMUST00000112473 1322 ntBASIC15.22■□□□□ 0.03
ClcnkaQ9WUB7 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ClcnkaQ9WUB7 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
ClcnkaQ9WUB7 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ClcnkaQ9WUB7 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ClcnkaQ9WUB7 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ClcnkaQ9WUB7 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
ClcnkaQ9WUB7 Mir5130-201ENSMUST00000175160 84 ntBASIC15.22■□□□□ 0.03
ClcnkaQ9WUB7 AC107711.5-202ENSMUST00000226429 702 ntBASIC15.22■□□□□ 0.03
ClcnkaQ9WUB7 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ClcnkaQ9WUB7 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC15.22■□□□□ 0.03
ClcnkaQ9WUB7 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ClcnkaQ9WUB7 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ClcnkaQ9WUB7 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC15.22■□□□□ 0.03
ClcnkaQ9WUB7 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ClcnkaQ9WUB7 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC15.22■□□□□ 0.03
ClcnkaQ9WUB7 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
ClcnkaQ9WUB7 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ClcnkaQ9WUB7 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ClcnkaQ9WUB7 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ClcnkaQ9WUB7 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC15.22■□□□□ 0.03
ClcnkaQ9WUB7 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ClcnkaQ9WUB7 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
ClcnkaQ9WUB7 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ClcnkaQ9WUB7 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ClcnkaQ9WUB7 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
ClcnkaQ9WUB7 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ClcnkaQ9WUB7 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
ClcnkaQ9WUB7 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ClcnkaQ9WUB7 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ClcnkaQ9WUB7 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ClcnkaQ9WUB7 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ClcnkaQ9WUB7 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
ClcnkaQ9WUB7 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC15.21■□□□□ 0.03
ClcnkaQ9WUB7 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
ClcnkaQ9WUB7 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC15.21■□□□□ 0.03
ClcnkaQ9WUB7 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ClcnkaQ9WUB7 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC15.21■□□□□ 0.03
ClcnkaQ9WUB7 Gm45058-201ENSMUST00000205810 766 ntBASIC15.21■□□□□ 0.03
ClcnkaQ9WUB7 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
ClcnkaQ9WUB7 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC15.21■□□□□ 0.03
ClcnkaQ9WUB7 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ClcnkaQ9WUB7 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ClcnkaQ9WUB7 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
ClcnkaQ9WUB7 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
ClcnkaQ9WUB7 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ClcnkaQ9WUB7 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ClcnkaQ9WUB7 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
ClcnkaQ9WUB7 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ClcnkaQ9WUB7 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
ClcnkaQ9WUB7 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
ClcnkaQ9WUB7 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
ClcnkaQ9WUB7 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC15.21■□□□□ 0.02
ClcnkaQ9WUB7 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
ClcnkaQ9WUB7 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
ClcnkaQ9WUB7 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ClcnkaQ9WUB7 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
ClcnkaQ9WUB7 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ClcnkaQ9WUB7 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC15.2■□□□□ 0.02
ClcnkaQ9WUB7 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ClcnkaQ9WUB7 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC15.2■□□□□ 0.02
ClcnkaQ9WUB7 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC15.2■□□□□ 0.02
ClcnkaQ9WUB7 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
ClcnkaQ9WUB7 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ClcnkaQ9WUB7 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC15.2■□□□□ 0.02
ClcnkaQ9WUB7 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ClcnkaQ9WUB7 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
ClcnkaQ9WUB7 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ClcnkaQ9WUB7 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ClcnkaQ9WUB7 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
ClcnkaQ9WUB7 Wnt10b-204ENSMUST00000226655 1807 ntBASIC15.2■□□□□ 0.02
ClcnkaQ9WUB7 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms