Protein–RNA interactions for Protein: Q9R1Q9

Atp6ap1, V-type proton ATPase subunit S1, mousemouse

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6ap1Q9R1Q9 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC16.21■□□□□ 0.19
Atp6ap1Q9R1Q9 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Atp6ap1Q9R1Q9 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Atp6ap1Q9R1Q9 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Atp6ap1Q9R1Q9 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Atp6ap1Q9R1Q9 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Atp6ap1Q9R1Q9 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Atp6ap1Q9R1Q9 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Atp6ap1Q9R1Q9 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Atp6ap1Q9R1Q9 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Atp6ap1Q9R1Q9 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC16.2■□□□□ 0.18
Atp6ap1Q9R1Q9 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Atp6ap1Q9R1Q9 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Atp6ap1Q9R1Q9 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Atp6ap1Q9R1Q9 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC16.2■□□□□ 0.18
Atp6ap1Q9R1Q9 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Atp6ap1Q9R1Q9 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Atp6ap1Q9R1Q9 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Atp6ap1Q9R1Q9 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC16.2■□□□□ 0.18
Atp6ap1Q9R1Q9 AC122351.1-201ENSMUST00000220467 126 ntBASIC16.2■□□□□ 0.18
Atp6ap1Q9R1Q9 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Atp6ap1Q9R1Q9 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Atp6ap1Q9R1Q9 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Atp6ap1Q9R1Q9 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC16.2■□□□□ 0.18
Atp6ap1Q9R1Q9 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Atp6ap1Q9R1Q9 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Atp6ap1Q9R1Q9 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Atp6ap1Q9R1Q9 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Atp6ap1Q9R1Q9 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Atp6ap1Q9R1Q9 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Atp6ap1Q9R1Q9 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Atp6ap1Q9R1Q9 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Atp6ap1Q9R1Q9 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Atp6ap1Q9R1Q9 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Atp6ap1Q9R1Q9 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Atp6ap1Q9R1Q9 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Atp6ap1Q9R1Q9 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Atp6ap1Q9R1Q9 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Atp6ap1Q9R1Q9 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Atp6ap1Q9R1Q9 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Atp6ap1Q9R1Q9 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Atp6ap1Q9R1Q9 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Atp6ap1Q9R1Q9 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Atp6ap1Q9R1Q9 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Atp6ap1Q9R1Q9 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Atp6ap1Q9R1Q9 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Atp6ap1Q9R1Q9 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Atp6ap1Q9R1Q9 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Atp6ap1Q9R1Q9 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Atp6ap1Q9R1Q9 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Atp6ap1Q9R1Q9 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Atp6ap1Q9R1Q9 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Atp6ap1Q9R1Q9 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Atp6ap1Q9R1Q9 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
Atp6ap1Q9R1Q9 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Atp6ap1Q9R1Q9 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Atp6ap1Q9R1Q9 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Atp6ap1Q9R1Q9 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Atp6ap1Q9R1Q9 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Atp6ap1Q9R1Q9 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
Atp6ap1Q9R1Q9 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Atp6ap1Q9R1Q9 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Atp6ap1Q9R1Q9 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Atp6ap1Q9R1Q9 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC16.18■□□□□ 0.18
Atp6ap1Q9R1Q9 Gm44450-201ENSMUST00000199528 114 ntBASIC16.18■□□□□ 0.18
Atp6ap1Q9R1Q9 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Atp6ap1Q9R1Q9 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Atp6ap1Q9R1Q9 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Atp6ap1Q9R1Q9 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Atp6ap1Q9R1Q9 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Atp6ap1Q9R1Q9 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC16.18■□□□□ 0.18
Atp6ap1Q9R1Q9 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Atp6ap1Q9R1Q9 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Atp6ap1Q9R1Q9 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Atp6ap1Q9R1Q9 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Atp6ap1Q9R1Q9 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Atp6ap1Q9R1Q9 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Atp6ap1Q9R1Q9 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Atp6ap1Q9R1Q9 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Atp6ap1Q9R1Q9 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC16.17■□□□□ 0.18
Atp6ap1Q9R1Q9 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Atp6ap1Q9R1Q9 Gm45774-201ENSMUST00000211992 2665 ntBASIC16.17■□□□□ 0.18
Atp6ap1Q9R1Q9 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC16.17■□□□□ 0.18
Atp6ap1Q9R1Q9 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Atp6ap1Q9R1Q9 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Atp6ap1Q9R1Q9 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Atp6ap1Q9R1Q9 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Atp6ap1Q9R1Q9 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
Atp6ap1Q9R1Q9 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Atp6ap1Q9R1Q9 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Atp6ap1Q9R1Q9 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Atp6ap1Q9R1Q9 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Atp6ap1Q9R1Q9 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Atp6ap1Q9R1Q9 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
Atp6ap1Q9R1Q9 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Atp6ap1Q9R1Q9 Zfp264-201ENSMUST00000208656 1563 ntBASIC16.17■□□□□ 0.18
Atp6ap1Q9R1Q9 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Atp6ap1Q9R1Q9 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Atp6ap1Q9R1Q9 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Atp6ap1Q9R1Q9 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms