Protein–RNA interactions for Protein: Q9R0A1

Clcn2, Chloride channel protein 2, mousemouse

Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn2Q9R0A1 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Clcn2Q9R0A1 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Clcn2Q9R0A1 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC16.92■□□□□ 0.3
Clcn2Q9R0A1 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Clcn2Q9R0A1 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clcn2Q9R0A1 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clcn2Q9R0A1 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clcn2Q9R0A1 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Clcn2Q9R0A1 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC16.91■□□□□ 0.3
Clcn2Q9R0A1 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clcn2Q9R0A1 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clcn2Q9R0A1 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clcn2Q9R0A1 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clcn2Q9R0A1 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
Clcn2Q9R0A1 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clcn2Q9R0A1 Gm6433-201ENSMUST00000118634 875 ntBASIC16.91■□□□□ 0.3
Clcn2Q9R0A1 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC16.91■□□□□ 0.3
Clcn2Q9R0A1 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clcn2Q9R0A1 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Clcn2Q9R0A1 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Clcn2Q9R0A1 Gm29994-201ENSMUST00000195495 1193 ntBASIC16.91■□□□□ 0.3
Clcn2Q9R0A1 Gm43353-201ENSMUST00000199224 1295 ntBASIC16.91■□□□□ 0.3
Clcn2Q9R0A1 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clcn2Q9R0A1 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clcn2Q9R0A1 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clcn2Q9R0A1 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clcn2Q9R0A1 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Clcn2Q9R0A1 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Clcn2Q9R0A1 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC16.91■□□□□ 0.3
Clcn2Q9R0A1 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clcn2Q9R0A1 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clcn2Q9R0A1 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clcn2Q9R0A1 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Clcn2Q9R0A1 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clcn2Q9R0A1 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clcn2Q9R0A1 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clcn2Q9R0A1 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Clcn2Q9R0A1 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Clcn2Q9R0A1 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Clcn2Q9R0A1 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Clcn2Q9R0A1 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
Clcn2Q9R0A1 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Clcn2Q9R0A1 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Clcn2Q9R0A1 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Clcn2Q9R0A1 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Clcn2Q9R0A1 Mir7071-201ENSMUST00000184847 69 ntBASIC16.9■□□□□ 0.3
Clcn2Q9R0A1 AC153881.2-201ENSMUST00000214877 204 ntBASIC16.9■□□□□ 0.3
Clcn2Q9R0A1 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Clcn2Q9R0A1 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Clcn2Q9R0A1 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Clcn2Q9R0A1 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Clcn2Q9R0A1 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Clcn2Q9R0A1 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Clcn2Q9R0A1 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC16.9■□□□□ 0.3
Clcn2Q9R0A1 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Clcn2Q9R0A1 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Clcn2Q9R0A1 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Clcn2Q9R0A1 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC16.89■□□□□ 0.3
Clcn2Q9R0A1 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Clcn2Q9R0A1 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Clcn2Q9R0A1 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Clcn2Q9R0A1 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Clcn2Q9R0A1 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Clcn2Q9R0A1 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Clcn2Q9R0A1 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC16.89■□□□□ 0.29
Clcn2Q9R0A1 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Clcn2Q9R0A1 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Clcn2Q9R0A1 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Clcn2Q9R0A1 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
Clcn2Q9R0A1 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Clcn2Q9R0A1 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Clcn2Q9R0A1 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Clcn2Q9R0A1 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Clcn2Q9R0A1 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Clcn2Q9R0A1 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Clcn2Q9R0A1 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Clcn2Q9R0A1 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Clcn2Q9R0A1 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Clcn2Q9R0A1 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Clcn2Q9R0A1 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Clcn2Q9R0A1 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Clcn2Q9R0A1 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.88■□□□□ 0.29
Clcn2Q9R0A1 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
Clcn2Q9R0A1 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Clcn2Q9R0A1 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC16.88■□□□□ 0.29
Clcn2Q9R0A1 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Clcn2Q9R0A1 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Clcn2Q9R0A1 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Clcn2Q9R0A1 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Clcn2Q9R0A1 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC16.88■□□□□ 0.29
Clcn2Q9R0A1 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Clcn2Q9R0A1 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Clcn2Q9R0A1 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC16.88■□□□□ 0.29
Clcn2Q9R0A1 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Clcn2Q9R0A1 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Clcn2Q9R0A1 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Clcn2Q9R0A1 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Clcn2Q9R0A1 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Clcn2Q9R0A1 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC16.88■□□□□ 0.29
Clcn2Q9R0A1 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms