Protein–RNA interactions for Protein: Q9QZR9

Col4a4, Collagen alpha-4(IV) chain, mousemouse

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a4Q9QZR9 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col4a4Q9QZR9 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col4a4Q9QZR9 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col4a4Q9QZR9 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col4a4Q9QZR9 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Col4a4Q9QZR9 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Col4a4Q9QZR9 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC16.52■□□□□ 0.24
Col4a4Q9QZR9 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Col4a4Q9QZR9 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.24
Col4a4Q9QZR9 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Col4a4Q9QZR9 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Col4a4Q9QZR9 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Col4a4Q9QZR9 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Col4a4Q9QZR9 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.23
Col4a4Q9QZR9 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Col4a4Q9QZR9 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Col4a4Q9QZR9 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC16.52■□□□□ 0.23
Col4a4Q9QZR9 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC16.52■□□□□ 0.23
Col4a4Q9QZR9 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.23
Col4a4Q9QZR9 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Col4a4Q9QZR9 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC16.52■□□□□ 0.23
Col4a4Q9QZR9 CT025535.1-201ENSMUST00000227172 491 ntBASIC16.52■□□□□ 0.23
Col4a4Q9QZR9 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC16.52■□□□□ 0.23
Col4a4Q9QZR9 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Col4a4Q9QZR9 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Col4a4Q9QZR9 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Col4a4Q9QZR9 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Col4a4Q9QZR9 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Col4a4Q9QZR9 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Col4a4Q9QZR9 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col4a4Q9QZR9 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Col4a4Q9QZR9 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC16.51■□□□□ 0.23
Col4a4Q9QZR9 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Col4a4Q9QZR9 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col4a4Q9QZR9 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC16.51■□□□□ 0.23
Col4a4Q9QZR9 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Col4a4Q9QZR9 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col4a4Q9QZR9 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col4a4Q9QZR9 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Col4a4Q9QZR9 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC16.51■□□□□ 0.23
Col4a4Q9QZR9 Gm5828-201ENSMUST00000071842 1860 ntBASIC16.51■□□□□ 0.23
Col4a4Q9QZR9 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col4a4Q9QZR9 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Col4a4Q9QZR9 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col4a4Q9QZR9 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Col4a4Q9QZR9 Gm12892-201ENSMUST00000117367 1146 ntBASIC16.5■□□□□ 0.23
Col4a4Q9QZR9 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
Col4a4Q9QZR9 Gm43474-201ENSMUST00000196415 774 ntBASIC16.5■□□□□ 0.23
Col4a4Q9QZR9 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC16.5■□□□□ 0.23
Col4a4Q9QZR9 Arhgef33-209ENSMUST00000225223 714 ntBASIC16.5■□□□□ 0.23
Col4a4Q9QZR9 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Col4a4Q9QZR9 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col4a4Q9QZR9 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC16.5■□□□□ 0.23
Col4a4Q9QZR9 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col4a4Q9QZR9 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col4a4Q9QZR9 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col4a4Q9QZR9 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Col4a4Q9QZR9 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
Col4a4Q9QZR9 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Col4a4Q9QZR9 Gm45747-201ENSMUST00000212203 999 ntBASIC16.5■□□□□ 0.23
Col4a4Q9QZR9 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC16.5■□□□□ 0.23
Col4a4Q9QZR9 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col4a4Q9QZR9 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col4a4Q9QZR9 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Col4a4Q9QZR9 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col4a4Q9QZR9 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col4a4Q9QZR9 Nrn1-204ENSMUST00000224323 1779 ntBASIC16.49■□□□□ 0.23
Col4a4Q9QZR9 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col4a4Q9QZR9 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col4a4Q9QZR9 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col4a4Q9QZR9 Best4-ps-201ENSMUST00000129783 1380 ntBASIC16.49■□□□□ 0.23
Col4a4Q9QZR9 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col4a4Q9QZR9 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Col4a4Q9QZR9 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Col4a4Q9QZR9 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col4a4Q9QZR9 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col4a4Q9QZR9 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC16.49■□□□□ 0.23
Col4a4Q9QZR9 Gm8344-201ENSMUST00000119813 856 ntBASIC16.49■□□□□ 0.23
Col4a4Q9QZR9 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
Col4a4Q9QZR9 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Col4a4Q9QZR9 Gm18622-201ENSMUST00000219361 595 ntBASIC16.49■□□□□ 0.23
Col4a4Q9QZR9 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col4a4Q9QZR9 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col4a4Q9QZR9 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col4a4Q9QZR9 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Col4a4Q9QZR9 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col4a4Q9QZR9 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Col4a4Q9QZR9 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col4a4Q9QZR9 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col4a4Q9QZR9 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Col4a4Q9QZR9 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC16.48■□□□□ 0.23
Col4a4Q9QZR9 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC16.48■□□□□ 0.23
Col4a4Q9QZR9 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC16.48■□□□□ 0.23
Col4a4Q9QZR9 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Col4a4Q9QZR9 Gm5745-201ENSMUST00000183748 313 ntBASIC16.48■□□□□ 0.23
Col4a4Q9QZR9 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC16.48■□□□□ 0.23
Col4a4Q9QZR9 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col4a4Q9QZR9 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col4a4Q9QZR9 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col4a4Q9QZR9 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms