Protein–RNA interactions for Protein: Q9QZM3

Clcf1, Cardiotrophin-like cytokine factor 1, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcf1Q9QZM3 Gm9013-201ENSMUST00000132939 882 ntBASIC15.03■□□□□ -0
Clcf1Q9QZM3 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC15.03■□□□□ -0
Clcf1Q9QZM3 Gm26039-201ENSMUST00000158152 144 ntBASIC15.03■□□□□ -0
Clcf1Q9QZM3 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Clcf1Q9QZM3 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Clcf1Q9QZM3 Gm21362-201ENSMUST00000194272 928 ntBASIC15.03■□□□□ -0
Clcf1Q9QZM3 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Clcf1Q9QZM3 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Clcf1Q9QZM3 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Clcf1Q9QZM3 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Clcf1Q9QZM3 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC15.03■□□□□ -0
Clcf1Q9QZM3 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Clcf1Q9QZM3 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Clcf1Q9QZM3 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
Clcf1Q9QZM3 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Clcf1Q9QZM3 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Clcf1Q9QZM3 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Clcf1Q9QZM3 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Clcf1Q9QZM3 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Clcf1Q9QZM3 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Clcf1Q9QZM3 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC15.02■□□□□ -0
Clcf1Q9QZM3 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC15.02■□□□□ -0
Clcf1Q9QZM3 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Clcf1Q9QZM3 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC15.02■□□□□ -0
Clcf1Q9QZM3 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC15.02■□□□□ -0
Clcf1Q9QZM3 Gm8258-201ENSMUST00000055593 1449 ntBASIC15.02■□□□□ -0
Clcf1Q9QZM3 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Clcf1Q9QZM3 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Clcf1Q9QZM3 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Clcf1Q9QZM3 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC15.02■□□□□ -0
Clcf1Q9QZM3 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC15.02■□□□□ -0
Clcf1Q9QZM3 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Clcf1Q9QZM3 Gm5587-201ENSMUST00000206270 674 ntBASIC15.02■□□□□ -0
Clcf1Q9QZM3 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC15.02■□□□□ -0
Clcf1Q9QZM3 Gm7367-201ENSMUST00000057611 492 ntBASIC15.02■□□□□ -0
Clcf1Q9QZM3 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC15.02□□□□□ -0.01
Clcf1Q9QZM3 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Clcf1Q9QZM3 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Clcf1Q9QZM3 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Clcf1Q9QZM3 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Clcf1Q9QZM3 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Clcf1Q9QZM3 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC15.02□□□□□ -0.01
Clcf1Q9QZM3 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Clcf1Q9QZM3 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Clcf1Q9QZM3 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Clcf1Q9QZM3 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Clcf1Q9QZM3 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Clcf1Q9QZM3 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC15.02□□□□□ -0.01
Clcf1Q9QZM3 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC15.01□□□□□ -0.01
Clcf1Q9QZM3 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Clcf1Q9QZM3 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Clcf1Q9QZM3 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Clcf1Q9QZM3 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Clcf1Q9QZM3 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Clcf1Q9QZM3 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Clcf1Q9QZM3 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Clcf1Q9QZM3 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
Clcf1Q9QZM3 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Clcf1Q9QZM3 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Clcf1Q9QZM3 Gm11355-201ENSMUST00000121120 306 ntBASIC15.01□□□□□ -0.01
Clcf1Q9QZM3 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC15.01□□□□□ -0.01
Clcf1Q9QZM3 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC15.01□□□□□ -0.01
Clcf1Q9QZM3 Gm27000-201ENSMUST00000182943 842 ntBASIC15.01□□□□□ -0.01
Clcf1Q9QZM3 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Clcf1Q9QZM3 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Clcf1Q9QZM3 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Clcf1Q9QZM3 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Clcf1Q9QZM3 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC15.01□□□□□ -0.01
Clcf1Q9QZM3 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC15.01□□□□□ -0.01
Clcf1Q9QZM3 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Clcf1Q9QZM3 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Clcf1Q9QZM3 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Clcf1Q9QZM3 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Clcf1Q9QZM3 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Clcf1Q9QZM3 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC15□□□□□ -0.01
Clcf1Q9QZM3 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Clcf1Q9QZM3 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Clcf1Q9QZM3 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Clcf1Q9QZM3 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC15□□□□□ -0.01
Clcf1Q9QZM3 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC15□□□□□ -0.01
Clcf1Q9QZM3 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Clcf1Q9QZM3 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC15□□□□□ -0.01
Clcf1Q9QZM3 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Clcf1Q9QZM3 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC15□□□□□ -0.01
Clcf1Q9QZM3 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC15□□□□□ -0.01
Clcf1Q9QZM3 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Clcf1Q9QZM3 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Clcf1Q9QZM3 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Clcf1Q9QZM3 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Clcf1Q9QZM3 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC15□□□□□ -0.01
Clcf1Q9QZM3 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC15□□□□□ -0.01
Clcf1Q9QZM3 Gm26917-202ENSMUST00000192833 3329 ntBASIC15□□□□□ -0.01
Clcf1Q9QZM3 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Clcf1Q9QZM3 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Clcf1Q9QZM3 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC14.99□□□□□ -0.01
Clcf1Q9QZM3 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Clcf1Q9QZM3 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Clcf1Q9QZM3 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Clcf1Q9QZM3 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Clcf1Q9QZM3 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms