Protein–RNA interactions for Protein: Q9JJV9

Scn5a, Sodium channel protein type 5 subunit alpha, mousemouse

Predictions only

Length 2,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn5aQ9JJV9 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Scn5aQ9JJV9 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Scn5aQ9JJV9 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Scn5aQ9JJV9 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
Scn5aQ9JJV9 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC17.04■□□□□ 0.32
Scn5aQ9JJV9 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Scn5aQ9JJV9 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC17.03■□□□□ 0.32
Scn5aQ9JJV9 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Scn5aQ9JJV9 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC17.03■□□□□ 0.32
Scn5aQ9JJV9 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
Scn5aQ9JJV9 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC17.03■□□□□ 0.32
Scn5aQ9JJV9 Gm9172-201ENSMUST00000212092 954 ntBASIC17.03■□□□□ 0.32
Scn5aQ9JJV9 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Scn5aQ9JJV9 Gm10175-201ENSMUST00000086013 645 ntBASIC17.03■□□□□ 0.32
Scn5aQ9JJV9 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Scn5aQ9JJV9 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Scn5aQ9JJV9 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Scn5aQ9JJV9 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Scn5aQ9JJV9 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Scn5aQ9JJV9 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Scn5aQ9JJV9 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Scn5aQ9JJV9 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Scn5aQ9JJV9 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC17.03■□□□□ 0.32
Scn5aQ9JJV9 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Scn5aQ9JJV9 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Scn5aQ9JJV9 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Scn5aQ9JJV9 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Scn5aQ9JJV9 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Scn5aQ9JJV9 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Scn5aQ9JJV9 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Scn5aQ9JJV9 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.02■□□□□ 0.32
Scn5aQ9JJV9 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Scn5aQ9JJV9 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
Scn5aQ9JJV9 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Scn5aQ9JJV9 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Scn5aQ9JJV9 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Scn5aQ9JJV9 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Scn5aQ9JJV9 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Scn5aQ9JJV9 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC17.02■□□□□ 0.32
Scn5aQ9JJV9 Gm6736-201ENSMUST00000166583 948 ntBASIC17.02■□□□□ 0.32
Scn5aQ9JJV9 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Scn5aQ9JJV9 Gm2213-201ENSMUST00000197485 688 ntBASIC17.02■□□□□ 0.32
Scn5aQ9JJV9 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC17.02■□□□□ 0.32
Scn5aQ9JJV9 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Scn5aQ9JJV9 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Scn5aQ9JJV9 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Scn5aQ9JJV9 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Scn5aQ9JJV9 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Scn5aQ9JJV9 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Scn5aQ9JJV9 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Scn5aQ9JJV9 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Scn5aQ9JJV9 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Scn5aQ9JJV9 Gm14822-201ENSMUST00000122247 291 ntBASIC17.01■□□□□ 0.31
Scn5aQ9JJV9 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Scn5aQ9JJV9 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Scn5aQ9JJV9 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC17.01■□□□□ 0.31
Scn5aQ9JJV9 AC107711.5-202ENSMUST00000226429 702 ntBASIC17.01■□□□□ 0.31
Scn5aQ9JJV9 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Scn5aQ9JJV9 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Scn5aQ9JJV9 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Scn5aQ9JJV9 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Scn5aQ9JJV9 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Scn5aQ9JJV9 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Scn5aQ9JJV9 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Scn5aQ9JJV9 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Scn5aQ9JJV9 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Scn5aQ9JJV9 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Scn5aQ9JJV9 Gm5682-201ENSMUST00000173402 505 ntBASIC17.01■□□□□ 0.31
Scn5aQ9JJV9 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC17.01■□□□□ 0.31
Scn5aQ9JJV9 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC17.01■□□□□ 0.31
Scn5aQ9JJV9 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Scn5aQ9JJV9 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Scn5aQ9JJV9 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Scn5aQ9JJV9 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC17■□□□□ 0.31
Scn5aQ9JJV9 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Scn5aQ9JJV9 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Scn5aQ9JJV9 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC17■□□□□ 0.31
Scn5aQ9JJV9 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Scn5aQ9JJV9 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Scn5aQ9JJV9 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Scn5aQ9JJV9 Gm23935-201ENSMUST00000102303 57 ntBASIC17■□□□□ 0.31
Scn5aQ9JJV9 Gm24270-201ENSMUST00000102326 57 ntBASIC17■□□□□ 0.31
Scn5aQ9JJV9 Gm24245-201ENSMUST00000157318 57 ntBASIC17■□□□□ 0.31
Scn5aQ9JJV9 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Scn5aQ9JJV9 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
Scn5aQ9JJV9 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17■□□□□ 0.31
Scn5aQ9JJV9 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Scn5aQ9JJV9 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Scn5aQ9JJV9 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Scn5aQ9JJV9 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Scn5aQ9JJV9 Gm15743-202ENSMUST00000182690 1901 ntBASIC16.99■□□□□ 0.31
Scn5aQ9JJV9 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC16.99■□□□□ 0.31
Scn5aQ9JJV9 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Scn5aQ9JJV9 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC16.99■□□□□ 0.31
Scn5aQ9JJV9 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Scn5aQ9JJV9 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Scn5aQ9JJV9 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Scn5aQ9JJV9 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Scn5aQ9JJV9 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
Scn5aQ9JJV9 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms