Protein–RNA interactions for Protein: Q9JIL2

Ccl28, C-C motif chemokine 28, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl28Q9JIL2 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC13.38□□□□□ -0.27
Ccl28Q9JIL2 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ccl28Q9JIL2 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccl28Q9JIL2 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccl28Q9JIL2 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Ccl28Q9JIL2 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC13.38□□□□□ -0.27
Ccl28Q9JIL2 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ccl28Q9JIL2 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccl28Q9JIL2 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ccl28Q9JIL2 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC13.38□□□□□ -0.27
Ccl28Q9JIL2 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ccl28Q9JIL2 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC13.38□□□□□ -0.27
Ccl28Q9JIL2 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC13.38□□□□□ -0.27
Ccl28Q9JIL2 AC120002.2-201ENSMUST00000220205 773 ntBASIC13.38□□□□□ -0.27
Ccl28Q9JIL2 AC154649.1-201ENSMUST00000227392 384 ntBASIC13.38□□□□□ -0.27
Ccl28Q9JIL2 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccl28Q9JIL2 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC13.38□□□□□ -0.27
Ccl28Q9JIL2 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Ccl28Q9JIL2 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccl28Q9JIL2 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccl28Q9JIL2 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccl28Q9JIL2 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccl28Q9JIL2 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccl28Q9JIL2 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ccl28Q9JIL2 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccl28Q9JIL2 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccl28Q9JIL2 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccl28Q9JIL2 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccl28Q9JIL2 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ccl28Q9JIL2 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccl28Q9JIL2 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ccl28Q9JIL2 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccl28Q9JIL2 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ccl28Q9JIL2 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccl28Q9JIL2 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Ccl28Q9JIL2 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccl28Q9JIL2 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccl28Q9JIL2 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ccl28Q9JIL2 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccl28Q9JIL2 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccl28Q9JIL2 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Ccl28Q9JIL2 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccl28Q9JIL2 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccl28Q9JIL2 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccl28Q9JIL2 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccl28Q9JIL2 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccl28Q9JIL2 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Ccl28Q9JIL2 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccl28Q9JIL2 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccl28Q9JIL2 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccl28Q9JIL2 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ccl28Q9JIL2 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
Ccl28Q9JIL2 Gm18958-201ENSMUST00000174258 762 ntBASIC13.37□□□□□ -0.27
Ccl28Q9JIL2 Gm16042-201ENSMUST00000204813 1247 ntBASIC13.37□□□□□ -0.27
Ccl28Q9JIL2 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC13.37□□□□□ -0.27
Ccl28Q9JIL2 AC175538.1-201ENSMUST00000225343 1269 ntBASIC13.37□□□□□ -0.27
Ccl28Q9JIL2 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ccl28Q9JIL2 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Ccl28Q9JIL2 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Ccl28Q9JIL2 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC13.37□□□□□ -0.27
Ccl28Q9JIL2 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccl28Q9JIL2 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccl28Q9JIL2 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
Ccl28Q9JIL2 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccl28Q9JIL2 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccl28Q9JIL2 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC13.37□□□□□ -0.27
Ccl28Q9JIL2 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccl28Q9JIL2 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ccl28Q9JIL2 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccl28Q9JIL2 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ccl28Q9JIL2 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccl28Q9JIL2 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccl28Q9JIL2 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccl28Q9JIL2 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ccl28Q9JIL2 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccl28Q9JIL2 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ccl28Q9JIL2 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccl28Q9JIL2 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC13.36□□□□□ -0.27
Ccl28Q9JIL2 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Ccl28Q9JIL2 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ccl28Q9JIL2 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccl28Q9JIL2 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ccl28Q9JIL2 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccl28Q9JIL2 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
Ccl28Q9JIL2 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC13.36□□□□□ -0.27
Ccl28Q9JIL2 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Ccl28Q9JIL2 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Ccl28Q9JIL2 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccl28Q9JIL2 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC13.36□□□□□ -0.27
Ccl28Q9JIL2 AC153881.1-201ENSMUST00000214448 284 ntBASIC13.36□□□□□ -0.27
Ccl28Q9JIL2 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ccl28Q9JIL2 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccl28Q9JIL2 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccl28Q9JIL2 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccl28Q9JIL2 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ccl28Q9JIL2 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
Ccl28Q9JIL2 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccl28Q9JIL2 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccl28Q9JIL2 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccl28Q9JIL2 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms