Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Nkx2-4Q9EQM3 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Nkx2-4Q9EQM3 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Nkx2-4Q9EQM3 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Nkx2-4Q9EQM3 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Nkx2-4Q9EQM3 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Nkx2-4Q9EQM3 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Nkx2-4Q9EQM3 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Nkx2-4Q9EQM3 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nkx2-4Q9EQM3 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Nkx2-4Q9EQM3 Gm14701-201ENSMUST00000117156 348 ntBASIC16.95■□□□□ 0.3
Nkx2-4Q9EQM3 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC16.95■□□□□ 0.3
Nkx2-4Q9EQM3 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC16.95■□□□□ 0.3
Nkx2-4Q9EQM3 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
Nkx2-4Q9EQM3 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC16.95■□□□□ 0.3
Nkx2-4Q9EQM3 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC16.95■□□□□ 0.3
Nkx2-4Q9EQM3 Gm8655-201ENSMUST00000221159 852 ntBASIC16.95■□□□□ 0.3
Nkx2-4Q9EQM3 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Nkx2-4Q9EQM3 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Nkx2-4Q9EQM3 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Nkx2-4Q9EQM3 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nkx2-4Q9EQM3 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nkx2-4Q9EQM3 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nkx2-4Q9EQM3 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Nkx2-4Q9EQM3 Dmtn-210ENSMUST00000228824 2377 ntBASIC16.94■□□□□ 0.3
Nkx2-4Q9EQM3 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Nkx2-4Q9EQM3 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nkx2-4Q9EQM3 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nkx2-4Q9EQM3 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nkx2-4Q9EQM3 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nkx2-4Q9EQM3 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC16.94■□□□□ 0.3
Nkx2-4Q9EQM3 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nkx2-4Q9EQM3 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nkx2-4Q9EQM3 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nkx2-4Q9EQM3 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nkx2-4Q9EQM3 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nkx2-4Q9EQM3 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nkx2-4Q9EQM3 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nkx2-4Q9EQM3 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nkx2-4Q9EQM3 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nkx2-4Q9EQM3 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nkx2-4Q9EQM3 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Nkx2-4Q9EQM3 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nkx2-4Q9EQM3 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nkx2-4Q9EQM3 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Nkx2-4Q9EQM3 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC16.93■□□□□ 0.3
Nkx2-4Q9EQM3 Mir8117-201ENSMUST00000184773 107 ntBASIC16.93■□□□□ 0.3
Nkx2-4Q9EQM3 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC16.93■□□□□ 0.3
Nkx2-4Q9EQM3 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC16.93■□□□□ 0.3
Nkx2-4Q9EQM3 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Nkx2-4Q9EQM3 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nkx2-4Q9EQM3 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nkx2-4Q9EQM3 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nkx2-4Q9EQM3 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nkx2-4Q9EQM3 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC16.93■□□□□ 0.3
Nkx2-4Q9EQM3 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nkx2-4Q9EQM3 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nkx2-4Q9EQM3 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nkx2-4Q9EQM3 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nkx2-4Q9EQM3 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nkx2-4Q9EQM3 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Nkx2-4Q9EQM3 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Nkx2-4Q9EQM3 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nkx2-4Q9EQM3 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC16.92■□□□□ 0.3
Nkx2-4Q9EQM3 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nkx2-4Q9EQM3 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Nkx2-4Q9EQM3 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nkx2-4Q9EQM3 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Nkx2-4Q9EQM3 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nkx2-4Q9EQM3 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nkx2-4Q9EQM3 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Nkx2-4Q9EQM3 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Nkx2-4Q9EQM3 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
Nkx2-4Q9EQM3 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nkx2-4Q9EQM3 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC16.91■□□□□ 0.3
Nkx2-4Q9EQM3 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Nkx2-4Q9EQM3 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nkx2-4Q9EQM3 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC16.91■□□□□ 0.3
Nkx2-4Q9EQM3 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC16.91■□□□□ 0.3
Nkx2-4Q9EQM3 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
Nkx2-4Q9EQM3 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nkx2-4Q9EQM3 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC16.91■□□□□ 0.3
Nkx2-4Q9EQM3 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nkx2-4Q9EQM3 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Nkx2-4Q9EQM3 AC123834.2-201ENSMUST00000224038 2340 ntBASIC16.91■□□□□ 0.3
Nkx2-4Q9EQM3 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC16.91■□□□□ 0.3
Nkx2-4Q9EQM3 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nkx2-4Q9EQM3 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nkx2-4Q9EQM3 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Nkx2-4Q9EQM3 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nkx2-4Q9EQM3 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nkx2-4Q9EQM3 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Nkx2-4Q9EQM3 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nkx2-4Q9EQM3 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Nkx2-4Q9EQM3 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC16.9■□□□□ 0.3
Nkx2-4Q9EQM3 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC16.9■□□□□ 0.3
Nkx2-4Q9EQM3 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Nkx2-4Q9EQM3 AC159114.1-201ENSMUST00000220349 266 ntBASIC16.9■□□□□ 0.3
Nkx2-4Q9EQM3 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nkx2-4Q9EQM3 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms