Protein–RNA interactions for Protein: Q9DCR2

Ap3s1, AP-3 complex subunit sigma-1, mousemouse

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ap3s1Q9DCR2 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ap3s1Q9DCR2 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Ap3s1Q9DCR2 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ap3s1Q9DCR2 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ap3s1Q9DCR2 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ap3s1Q9DCR2 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ap3s1Q9DCR2 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ap3s1Q9DCR2 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ap3s1Q9DCR2 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
Ap3s1Q9DCR2 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ap3s1Q9DCR2 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
Ap3s1Q9DCR2 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Ap3s1Q9DCR2 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ap3s1Q9DCR2 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ap3s1Q9DCR2 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC14.8□□□□□ -0.04
Ap3s1Q9DCR2 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Ap3s1Q9DCR2 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ap3s1Q9DCR2 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Ap3s1Q9DCR2 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ap3s1Q9DCR2 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Ap3s1Q9DCR2 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ap3s1Q9DCR2 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ap3s1Q9DCR2 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ap3s1Q9DCR2 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC14.79□□□□□ -0.04
Ap3s1Q9DCR2 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ap3s1Q9DCR2 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Ap3s1Q9DCR2 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ap3s1Q9DCR2 Gm13509-201ENSMUST00000119733 1308 ntBASIC14.79□□□□□ -0.04
Ap3s1Q9DCR2 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ap3s1Q9DCR2 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ap3s1Q9DCR2 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ap3s1Q9DCR2 Gm21956-201ENSMUST00000179946 522 ntBASIC14.79□□□□□ -0.04
Ap3s1Q9DCR2 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ap3s1Q9DCR2 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ap3s1Q9DCR2 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ap3s1Q9DCR2 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ap3s1Q9DCR2 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ap3s1Q9DCR2 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ap3s1Q9DCR2 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ap3s1Q9DCR2 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Ap3s1Q9DCR2 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ap3s1Q9DCR2 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ap3s1Q9DCR2 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ap3s1Q9DCR2 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Ap3s1Q9DCR2 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ap3s1Q9DCR2 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ap3s1Q9DCR2 Gm43034-201ENSMUST00000198678 1364 ntBASIC14.78□□□□□ -0.04
Ap3s1Q9DCR2 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC14.78□□□□□ -0.04
Ap3s1Q9DCR2 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ap3s1Q9DCR2 Gm45417-201ENSMUST00000209533 758 ntBASIC14.78□□□□□ -0.04
Ap3s1Q9DCR2 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ap3s1Q9DCR2 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ap3s1Q9DCR2 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC14.78□□□□□ -0.04
Ap3s1Q9DCR2 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ap3s1Q9DCR2 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ap3s1Q9DCR2 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ap3s1Q9DCR2 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ap3s1Q9DCR2 Gm14026-201ENSMUST00000120625 1789 ntBASIC14.78□□□□□ -0.04
Ap3s1Q9DCR2 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ap3s1Q9DCR2 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ap3s1Q9DCR2 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ap3s1Q9DCR2 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Ap3s1Q9DCR2 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ap3s1Q9DCR2 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
Ap3s1Q9DCR2 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Ap3s1Q9DCR2 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Ap3s1Q9DCR2 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Ap3s1Q9DCR2 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.04
Ap3s1Q9DCR2 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ap3s1Q9DCR2 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ap3s1Q9DCR2 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ap3s1Q9DCR2 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ap3s1Q9DCR2 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC14.77□□□□□ -0.04
Ap3s1Q9DCR2 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Ap3s1Q9DCR2 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Ap3s1Q9DCR2 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
Ap3s1Q9DCR2 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.05
Ap3s1Q9DCR2 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
Ap3s1Q9DCR2 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ap3s1Q9DCR2 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Ap3s1Q9DCR2 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ap3s1Q9DCR2 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ap3s1Q9DCR2 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ap3s1Q9DCR2 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Ap3s1Q9DCR2 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ap3s1Q9DCR2 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ap3s1Q9DCR2 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ap3s1Q9DCR2 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ap3s1Q9DCR2 Flg-201ENSMUST00000050758 1488 ntBASIC14.76□□□□□ -0.05
Ap3s1Q9DCR2 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Ap3s1Q9DCR2 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ap3s1Q9DCR2 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC14.76□□□□□ -0.05
Ap3s1Q9DCR2 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC14.76□□□□□ -0.05
Ap3s1Q9DCR2 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC14.76□□□□□ -0.05
Ap3s1Q9DCR2 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ap3s1Q9DCR2 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC14.76□□□□□ -0.05
Ap3s1Q9DCR2 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC14.76□□□□□ -0.05
Ap3s1Q9DCR2 Wnt10b-205ENSMUST00000226846 1204 ntBASIC14.76□□□□□ -0.05
Ap3s1Q9DCR2 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ap3s1Q9DCR2 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms