Protein–RNA interactions for Protein: Q9D9Y8

Ssmem1, RIKEN cDNA 1700025E21, isoform CRA_b, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssmem1Q9D9Y8 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ssmem1Q9D9Y8 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ssmem1Q9D9Y8 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ssmem1Q9D9Y8 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ssmem1Q9D9Y8 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ssmem1Q9D9Y8 Gfra2-202ENSMUST00000227633 1480 ntBASIC14.31□□□□□ -0.12
Ssmem1Q9D9Y8 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ssmem1Q9D9Y8 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ssmem1Q9D9Y8 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ssmem1Q9D9Y8 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ssmem1Q9D9Y8 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Ssmem1Q9D9Y8 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ssmem1Q9D9Y8 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ssmem1Q9D9Y8 Gm45203-201ENSMUST00000206384 1831 ntBASIC14.3□□□□□ -0.12
Ssmem1Q9D9Y8 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ssmem1Q9D9Y8 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ssmem1Q9D9Y8 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ssmem1Q9D9Y8 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ssmem1Q9D9Y8 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ssmem1Q9D9Y8 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC14.3□□□□□ -0.12
Ssmem1Q9D9Y8 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ssmem1Q9D9Y8 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Ssmem1Q9D9Y8 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ssmem1Q9D9Y8 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ssmem1Q9D9Y8 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ssmem1Q9D9Y8 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ssmem1Q9D9Y8 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ssmem1Q9D9Y8 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ssmem1Q9D9Y8 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ssmem1Q9D9Y8 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Ssmem1Q9D9Y8 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ssmem1Q9D9Y8 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ssmem1Q9D9Y8 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ssmem1Q9D9Y8 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ssmem1Q9D9Y8 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ssmem1Q9D9Y8 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ssmem1Q9D9Y8 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ssmem1Q9D9Y8 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Ssmem1Q9D9Y8 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ssmem1Q9D9Y8 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ssmem1Q9D9Y8 Gm7292-201ENSMUST00000194706 2527 ntBASIC14.29□□□□□ -0.12
Ssmem1Q9D9Y8 Gm14859-201ENSMUST00000117752 357 ntBASIC14.29□□□□□ -0.12
Ssmem1Q9D9Y8 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ssmem1Q9D9Y8 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC14.29□□□□□ -0.12
Ssmem1Q9D9Y8 Gm45328-201ENSMUST00000210942 917 ntBASIC14.29□□□□□ -0.12
Ssmem1Q9D9Y8 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ssmem1Q9D9Y8 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ssmem1Q9D9Y8 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ssmem1Q9D9Y8 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
Ssmem1Q9D9Y8 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
Ssmem1Q9D9Y8 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ssmem1Q9D9Y8 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC14.29□□□□□ -0.12
Ssmem1Q9D9Y8 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ssmem1Q9D9Y8 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ssmem1Q9D9Y8 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ssmem1Q9D9Y8 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ssmem1Q9D9Y8 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC14.29□□□□□ -0.12
Ssmem1Q9D9Y8 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Ssmem1Q9D9Y8 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ssmem1Q9D9Y8 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ssmem1Q9D9Y8 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ssmem1Q9D9Y8 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ssmem1Q9D9Y8 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ssmem1Q9D9Y8 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Ssmem1Q9D9Y8 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ssmem1Q9D9Y8 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ssmem1Q9D9Y8 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ssmem1Q9D9Y8 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ssmem1Q9D9Y8 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ssmem1Q9D9Y8 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ssmem1Q9D9Y8 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
Ssmem1Q9D9Y8 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ssmem1Q9D9Y8 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC14.27□□□□□ -0.12
Ssmem1Q9D9Y8 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ssmem1Q9D9Y8 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Ssmem1Q9D9Y8 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC14.27□□□□□ -0.12
Ssmem1Q9D9Y8 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ssmem1Q9D9Y8 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
Ssmem1Q9D9Y8 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ssmem1Q9D9Y8 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ssmem1Q9D9Y8 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Ssmem1Q9D9Y8 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ssmem1Q9D9Y8 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC14.27□□□□□ -0.13
Ssmem1Q9D9Y8 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC14.27□□□□□ -0.13
Ssmem1Q9D9Y8 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC14.27□□□□□ -0.13
Ssmem1Q9D9Y8 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC14.27□□□□□ -0.13
Ssmem1Q9D9Y8 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC14.27□□□□□ -0.13
Ssmem1Q9D9Y8 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC14.27□□□□□ -0.13
Ssmem1Q9D9Y8 Gm21362-201ENSMUST00000194272 928 ntBASIC14.27□□□□□ -0.13
Ssmem1Q9D9Y8 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ssmem1Q9D9Y8 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ssmem1Q9D9Y8 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ssmem1Q9D9Y8 Gm7367-201ENSMUST00000057611 492 ntBASIC14.27□□□□□ -0.13
Ssmem1Q9D9Y8 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ssmem1Q9D9Y8 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Ssmem1Q9D9Y8 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ssmem1Q9D9Y8 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ssmem1Q9D9Y8 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ssmem1Q9D9Y8 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ssmem1Q9D9Y8 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms