Protein–RNA interactions for Protein: Q9D6Z1

Nop56, Nucleolar protein 56, mousemouse

Known RBP Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nop56Q9D6Z1 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Nop56Q9D6Z1 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nop56Q9D6Z1 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nop56Q9D6Z1 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC17.11■□□□□ 0.33
Nop56Q9D6Z1 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Nop56Q9D6Z1 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Nop56Q9D6Z1 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Nop56Q9D6Z1 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nop56Q9D6Z1 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nop56Q9D6Z1 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Nop56Q9D6Z1 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Nop56Q9D6Z1 Gm43598-201ENSMUST00000202482 2479 ntBASIC17.11■□□□□ 0.33
Nop56Q9D6Z1 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nop56Q9D6Z1 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nop56Q9D6Z1 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nop56Q9D6Z1 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Nop56Q9D6Z1 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nop56Q9D6Z1 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nop56Q9D6Z1 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nop56Q9D6Z1 AC153526.5-201ENSMUST00000218661 2147 ntBASIC17.11■□□□□ 0.33
Nop56Q9D6Z1 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nop56Q9D6Z1 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nop56Q9D6Z1 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nop56Q9D6Z1 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Nop56Q9D6Z1 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
Nop56Q9D6Z1 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Nop56Q9D6Z1 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nop56Q9D6Z1 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nop56Q9D6Z1 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nop56Q9D6Z1 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nop56Q9D6Z1 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC17.1■□□□□ 0.33
Nop56Q9D6Z1 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Nop56Q9D6Z1 AC166341.7-201ENSMUST00000221698 126 ntBASIC17.1■□□□□ 0.33
Nop56Q9D6Z1 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Nop56Q9D6Z1 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nop56Q9D6Z1 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nop56Q9D6Z1 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nop56Q9D6Z1 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nop56Q9D6Z1 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Nop56Q9D6Z1 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nop56Q9D6Z1 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nop56Q9D6Z1 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nop56Q9D6Z1 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nop56Q9D6Z1 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Nop56Q9D6Z1 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nop56Q9D6Z1 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nop56Q9D6Z1 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nop56Q9D6Z1 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Nop56Q9D6Z1 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nop56Q9D6Z1 AC107711.5-202ENSMUST00000226429 702 ntBASIC17.09■□□□□ 0.33
Nop56Q9D6Z1 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
Nop56Q9D6Z1 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nop56Q9D6Z1 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Nop56Q9D6Z1 AC133083.1-201ENSMUST00000221736 2209 ntBASIC17.09■□□□□ 0.33
Nop56Q9D6Z1 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nop56Q9D6Z1 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nop56Q9D6Z1 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nop56Q9D6Z1 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nop56Q9D6Z1 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Nop56Q9D6Z1 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Nop56Q9D6Z1 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Nop56Q9D6Z1 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Nop56Q9D6Z1 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Nop56Q9D6Z1 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Nop56Q9D6Z1 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nop56Q9D6Z1 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Nop56Q9D6Z1 Gm21596-201ENSMUST00000178049 1316 ntBASIC17.08■□□□□ 0.32
Nop56Q9D6Z1 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC17.08■□□□□ 0.32
Nop56Q9D6Z1 Gm27405-201ENSMUST00000184201 112 ntBASIC17.08■□□□□ 0.32
Nop56Q9D6Z1 Gm4974-201ENSMUST00000209974 875 ntBASIC17.08■□□□□ 0.32
Nop56Q9D6Z1 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nop56Q9D6Z1 AC163280.1-201ENSMUST00000228194 1100 ntBASIC17.08■□□□□ 0.32
Nop56Q9D6Z1 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nop56Q9D6Z1 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nop56Q9D6Z1 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nop56Q9D6Z1 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nop56Q9D6Z1 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Nop56Q9D6Z1 Gm16011-201ENSMUST00000121567 2662 ntBASIC17.08■□□□□ 0.32
Nop56Q9D6Z1 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nop56Q9D6Z1 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC17.08■□□□□ 0.32
Nop56Q9D6Z1 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nop56Q9D6Z1 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nop56Q9D6Z1 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Nop56Q9D6Z1 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Nop56Q9D6Z1 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nop56Q9D6Z1 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nop56Q9D6Z1 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nop56Q9D6Z1 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Nop56Q9D6Z1 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Nop56Q9D6Z1 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nop56Q9D6Z1 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Nop56Q9D6Z1 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nop56Q9D6Z1 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nop56Q9D6Z1 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nop56Q9D6Z1 Dio3-201ENSMUST00000097228 1449 ntBASIC17.07■□□□□ 0.32
Nop56Q9D6Z1 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nop56Q9D6Z1 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Nop56Q9D6Z1 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Nop56Q9D6Z1 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.07■□□□□ 0.32
Nop56Q9D6Z1 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms