Protein–RNA interactions for Protein: Q9D6I0

Rtl8c, Cxx1c protein, mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl8cQ9D6I0 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Rtl8cQ9D6I0 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rtl8cQ9D6I0 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rtl8cQ9D6I0 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rtl8cQ9D6I0 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Rtl8cQ9D6I0 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rtl8cQ9D6I0 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Rtl8cQ9D6I0 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Rtl8cQ9D6I0 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Rtl8cQ9D6I0 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rtl8cQ9D6I0 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rtl8cQ9D6I0 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC14.79□□□□□ -0.04
Rtl8cQ9D6I0 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rtl8cQ9D6I0 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Rtl8cQ9D6I0 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Rtl8cQ9D6I0 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC14.79□□□□□ -0.04
Rtl8cQ9D6I0 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rtl8cQ9D6I0 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC14.79□□□□□ -0.04
Rtl8cQ9D6I0 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Rtl8cQ9D6I0 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Rtl8cQ9D6I0 Mir1668-201ENSMUST00000184114 107 ntBASIC14.79□□□□□ -0.04
Rtl8cQ9D6I0 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC14.79□□□□□ -0.04
Rtl8cQ9D6I0 AC154231.1-201ENSMUST00000220564 2175 ntBASIC14.79□□□□□ -0.04
Rtl8cQ9D6I0 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rtl8cQ9D6I0 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rtl8cQ9D6I0 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rtl8cQ9D6I0 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rtl8cQ9D6I0 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Rtl8cQ9D6I0 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
Rtl8cQ9D6I0 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rtl8cQ9D6I0 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rtl8cQ9D6I0 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rtl8cQ9D6I0 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rtl8cQ9D6I0 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rtl8cQ9D6I0 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Rtl8cQ9D6I0 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rtl8cQ9D6I0 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rtl8cQ9D6I0 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rtl8cQ9D6I0 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Rtl8cQ9D6I0 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rtl8cQ9D6I0 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC14.78□□□□□ -0.04
Rtl8cQ9D6I0 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rtl8cQ9D6I0 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Rtl8cQ9D6I0 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Rtl8cQ9D6I0 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Rtl8cQ9D6I0 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Rtl8cQ9D6I0 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rtl8cQ9D6I0 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rtl8cQ9D6I0 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rtl8cQ9D6I0 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC14.78□□□□□ -0.04
Rtl8cQ9D6I0 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Rtl8cQ9D6I0 Gm29994-201ENSMUST00000195495 1193 ntBASIC14.78□□□□□ -0.04
Rtl8cQ9D6I0 Gm9484-201ENSMUST00000195892 1159 ntBASIC14.78□□□□□ -0.04
Rtl8cQ9D6I0 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC14.78□□□□□ -0.04
Rtl8cQ9D6I0 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC14.78□□□□□ -0.04
Rtl8cQ9D6I0 Gm7370-201ENSMUST00000219471 767 ntBASIC14.78□□□□□ -0.04
Rtl8cQ9D6I0 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Rtl8cQ9D6I0 Gm36858-201ENSMUST00000194501 2391 ntBASIC14.78□□□□□ -0.04
Rtl8cQ9D6I0 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rtl8cQ9D6I0 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rtl8cQ9D6I0 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC14.78□□□□□ -0.04
Rtl8cQ9D6I0 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rtl8cQ9D6I0 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rtl8cQ9D6I0 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rtl8cQ9D6I0 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Rtl8cQ9D6I0 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rtl8cQ9D6I0 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rtl8cQ9D6I0 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
Rtl8cQ9D6I0 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rtl8cQ9D6I0 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Rtl8cQ9D6I0 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rtl8cQ9D6I0 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC14.77□□□□□ -0.04
Rtl8cQ9D6I0 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rtl8cQ9D6I0 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Rtl8cQ9D6I0 Gm13559-201ENSMUST00000120476 863 ntBASIC14.77□□□□□ -0.05
Rtl8cQ9D6I0 Gm4217-201ENSMUST00000182243 1002 ntBASIC14.77□□□□□ -0.05
Rtl8cQ9D6I0 AL672049.1-201ENSMUST00000197943 91 ntBASIC14.77□□□□□ -0.05
Rtl8cQ9D6I0 AC122351.1-201ENSMUST00000220467 126 ntBASIC14.77□□□□□ -0.05
Rtl8cQ9D6I0 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC14.77□□□□□ -0.05
Rtl8cQ9D6I0 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rtl8cQ9D6I0 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rtl8cQ9D6I0 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rtl8cQ9D6I0 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rtl8cQ9D6I0 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC14.77□□□□□ -0.05
Rtl8cQ9D6I0 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Rtl8cQ9D6I0 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rtl8cQ9D6I0 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Rtl8cQ9D6I0 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rtl8cQ9D6I0 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rtl8cQ9D6I0 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rtl8cQ9D6I0 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Rtl8cQ9D6I0 Wnt10b-204ENSMUST00000226655 1807 ntBASIC14.77□□□□□ -0.05
Rtl8cQ9D6I0 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rtl8cQ9D6I0 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Rtl8cQ9D6I0 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Rtl8cQ9D6I0 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rtl8cQ9D6I0 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rtl8cQ9D6I0 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rtl8cQ9D6I0 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rtl8cQ9D6I0 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms