Protein–RNA interactions for Protein: Q9D2N9

Vps33a, Vacuolar protein sorting-associated protein 33A, mousemouse

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps33aQ9D2N9 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vps33aQ9D2N9 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vps33aQ9D2N9 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC17.6■□□□□ 0.41
Vps33aQ9D2N9 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Vps33aQ9D2N9 AC140264.2-202ENSMUST00000218746 817 ntBASIC17.6■□□□□ 0.41
Vps33aQ9D2N9 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vps33aQ9D2N9 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Vps33aQ9D2N9 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC17.6■□□□□ 0.41
Vps33aQ9D2N9 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vps33aQ9D2N9 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vps33aQ9D2N9 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vps33aQ9D2N9 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC17.6■□□□□ 0.41
Vps33aQ9D2N9 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Vps33aQ9D2N9 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
Vps33aQ9D2N9 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC17.6■□□□□ 0.41
Vps33aQ9D2N9 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vps33aQ9D2N9 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vps33aQ9D2N9 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vps33aQ9D2N9 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Vps33aQ9D2N9 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vps33aQ9D2N9 Gm45760-201ENSMUST00000212190 1782 ntBASIC17.59■□□□□ 0.41
Vps33aQ9D2N9 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vps33aQ9D2N9 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vps33aQ9D2N9 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vps33aQ9D2N9 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vps33aQ9D2N9 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vps33aQ9D2N9 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vps33aQ9D2N9 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Vps33aQ9D2N9 App-207ENSMUST00000227737 2827 ntBASIC17.58■□□□□ 0.41
Vps33aQ9D2N9 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Vps33aQ9D2N9 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Vps33aQ9D2N9 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Vps33aQ9D2N9 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Vps33aQ9D2N9 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Vps33aQ9D2N9 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC17.58■□□□□ 0.4
Vps33aQ9D2N9 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Vps33aQ9D2N9 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Vps33aQ9D2N9 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Vps33aQ9D2N9 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Vps33aQ9D2N9 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Vps33aQ9D2N9 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Vps33aQ9D2N9 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Vps33aQ9D2N9 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Vps33aQ9D2N9 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vps33aQ9D2N9 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vps33aQ9D2N9 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Vps33aQ9D2N9 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vps33aQ9D2N9 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vps33aQ9D2N9 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vps33aQ9D2N9 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Vps33aQ9D2N9 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vps33aQ9D2N9 Gm11960-202ENSMUST00000181063 2858 ntBASIC17.57■□□□□ 0.4
Vps33aQ9D2N9 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vps33aQ9D2N9 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Vps33aQ9D2N9 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Vps33aQ9D2N9 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vps33aQ9D2N9 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Vps33aQ9D2N9 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Vps33aQ9D2N9 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vps33aQ9D2N9 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vps33aQ9D2N9 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vps33aQ9D2N9 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vps33aQ9D2N9 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vps33aQ9D2N9 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Vps33aQ9D2N9 Zfp783-201ENSMUST00000095946 670 ntBASIC17.56■□□□□ 0.4
Vps33aQ9D2N9 AC174678.1-201ENSMUST00000228007 2749 ntBASIC17.56■□□□□ 0.4
Vps33aQ9D2N9 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC17.56■□□□□ 0.4
Vps33aQ9D2N9 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vps33aQ9D2N9 Wnt10b-204ENSMUST00000226655 1807 ntBASIC17.56■□□□□ 0.4
Vps33aQ9D2N9 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vps33aQ9D2N9 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC17.56■□□□□ 0.4
Vps33aQ9D2N9 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps33aQ9D2N9 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps33aQ9D2N9 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC17.55■□□□□ 0.4
Vps33aQ9D2N9 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps33aQ9D2N9 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps33aQ9D2N9 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps33aQ9D2N9 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps33aQ9D2N9 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps33aQ9D2N9 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps33aQ9D2N9 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Vps33aQ9D2N9 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps33aQ9D2N9 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Vps33aQ9D2N9 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC17.55■□□□□ 0.4
Vps33aQ9D2N9 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC17.55■□□□□ 0.4
Vps33aQ9D2N9 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps33aQ9D2N9 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Vps33aQ9D2N9 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Vps33aQ9D2N9 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps33aQ9D2N9 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vps33aQ9D2N9 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC17.54■□□□□ 0.4
Vps33aQ9D2N9 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vps33aQ9D2N9 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vps33aQ9D2N9 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Vps33aQ9D2N9 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vps33aQ9D2N9 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC17.54■□□□□ 0.4
Vps33aQ9D2N9 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vps33aQ9D2N9 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vps33aQ9D2N9 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Vps33aQ9D2N9 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms