Protein–RNA interactions for Protein: Q9D1H0

Rita1, RBPJ-interacting and tubulin-associated protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rita1Q9D1H0 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rita1Q9D1H0 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rita1Q9D1H0 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC15.21■□□□□ 0.03
Rita1Q9D1H0 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rita1Q9D1H0 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rita1Q9D1H0 Gm8839-201ENSMUST00000121279 1645 ntBASIC15.21■□□□□ 0.03
Rita1Q9D1H0 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rita1Q9D1H0 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC15.21■□□□□ 0.03
Rita1Q9D1H0 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rita1Q9D1H0 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rita1Q9D1H0 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rita1Q9D1H0 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rita1Q9D1H0 Gm27357-201ENSMUST00000183754 135 ntBASIC15.21■□□□□ 0.03
Rita1Q9D1H0 Ighv6-1-201ENSMUST00000193612 343 ntBASIC15.21■□□□□ 0.03
Rita1Q9D1H0 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rita1Q9D1H0 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Rita1Q9D1H0 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rita1Q9D1H0 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rita1Q9D1H0 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rita1Q9D1H0 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rita1Q9D1H0 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Rita1Q9D1H0 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Rita1Q9D1H0 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Rita1Q9D1H0 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
Rita1Q9D1H0 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Rita1Q9D1H0 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rita1Q9D1H0 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rita1Q9D1H0 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rita1Q9D1H0 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rita1Q9D1H0 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rita1Q9D1H0 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rita1Q9D1H0 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Rita1Q9D1H0 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC15.2■□□□□ 0.02
Rita1Q9D1H0 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rita1Q9D1H0 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC15.2■□□□□ 0.02
Rita1Q9D1H0 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rita1Q9D1H0 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rita1Q9D1H0 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rita1Q9D1H0 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rita1Q9D1H0 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rita1Q9D1H0 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rita1Q9D1H0 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rita1Q9D1H0 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rita1Q9D1H0 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rita1Q9D1H0 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Rita1Q9D1H0 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Rita1Q9D1H0 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rita1Q9D1H0 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rita1Q9D1H0 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rita1Q9D1H0 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rita1Q9D1H0 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rita1Q9D1H0 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rita1Q9D1H0 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rita1Q9D1H0 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rita1Q9D1H0 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Rita1Q9D1H0 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Rita1Q9D1H0 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC15.19■□□□□ 0.02
Rita1Q9D1H0 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC15.19■□□□□ 0.02
Rita1Q9D1H0 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rita1Q9D1H0 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC15.19■□□□□ 0.02
Rita1Q9D1H0 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rita1Q9D1H0 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rita1Q9D1H0 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rita1Q9D1H0 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Rita1Q9D1H0 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rita1Q9D1H0 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC15.19■□□□□ 0.02
Rita1Q9D1H0 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rita1Q9D1H0 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rita1Q9D1H0 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC15.19■□□□□ 0.02
Rita1Q9D1H0 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC15.19■□□□□ 0.02
Rita1Q9D1H0 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rita1Q9D1H0 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Rita1Q9D1H0 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rita1Q9D1H0 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Rita1Q9D1H0 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC15.18■□□□□ 0.02
Rita1Q9D1H0 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rita1Q9D1H0 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rita1Q9D1H0 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Rita1Q9D1H0 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
Rita1Q9D1H0 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rita1Q9D1H0 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rita1Q9D1H0 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC15.18■□□□□ 0.02
Rita1Q9D1H0 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
Rita1Q9D1H0 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC15.18■□□□□ 0.02
Rita1Q9D1H0 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC15.18■□□□□ 0.02
Rita1Q9D1H0 Gm18669-201ENSMUST00000216049 778 ntBASIC15.18■□□□□ 0.02
Rita1Q9D1H0 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rita1Q9D1H0 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rita1Q9D1H0 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rita1Q9D1H0 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rita1Q9D1H0 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rita1Q9D1H0 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Rita1Q9D1H0 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rita1Q9D1H0 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rita1Q9D1H0 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC15.18■□□□□ 0.02
Rita1Q9D1H0 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC15.17■□□□□ 0.02
Rita1Q9D1H0 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rita1Q9D1H0 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rita1Q9D1H0 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rita1Q9D1H0 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms