Protein–RNA interactions for Protein: Q9D0E3

Lysmd1, LysM and putative peptidoglycan-binding domain-containing protein 1, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd1Q9D0E3 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Lysmd1Q9D0E3 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
Lysmd1Q9D0E3 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC17.66■□□□□ 0.42
Lysmd1Q9D0E3 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lysmd1Q9D0E3 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lysmd1Q9D0E3 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Lysmd1Q9D0E3 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Lysmd1Q9D0E3 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lysmd1Q9D0E3 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lysmd1Q9D0E3 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Lysmd1Q9D0E3 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lysmd1Q9D0E3 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lysmd1Q9D0E3 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Lysmd1Q9D0E3 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lysmd1Q9D0E3 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC17.65■□□□□ 0.42
Lysmd1Q9D0E3 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lysmd1Q9D0E3 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lysmd1Q9D0E3 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lysmd1Q9D0E3 Gm7488-201ENSMUST00000117148 684 ntBASIC17.65■□□□□ 0.42
Lysmd1Q9D0E3 AC093926.2-201ENSMUST00000214468 1228 ntBASIC17.65■□□□□ 0.42
Lysmd1Q9D0E3 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Lysmd1Q9D0E3 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lysmd1Q9D0E3 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lysmd1Q9D0E3 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lysmd1Q9D0E3 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lysmd1Q9D0E3 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Lysmd1Q9D0E3 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Lysmd1Q9D0E3 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.64■□□□□ 0.42
Lysmd1Q9D0E3 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Lysmd1Q9D0E3 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lysmd1Q9D0E3 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC17.64■□□□□ 0.41
Lysmd1Q9D0E3 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Lysmd1Q9D0E3 Gm37374-201ENSMUST00000194954 1829 ntBASIC17.64■□□□□ 0.41
Lysmd1Q9D0E3 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Lysmd1Q9D0E3 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC17.64■□□□□ 0.41
Lysmd1Q9D0E3 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC17.64■□□□□ 0.41
Lysmd1Q9D0E3 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Lysmd1Q9D0E3 Gm27989-201ENSMUST00000184721 107 ntBASIC17.64■□□□□ 0.41
Lysmd1Q9D0E3 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC17.64■□□□□ 0.41
Lysmd1Q9D0E3 Gm10616-201ENSMUST00000205285 2127 ntBASIC17.64■□□□□ 0.41
Lysmd1Q9D0E3 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC17.64■□□□□ 0.41
Lysmd1Q9D0E3 AC149294.4-201ENSMUST00000227870 882 ntBASIC17.64■□□□□ 0.41
Lysmd1Q9D0E3 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.64■□□□□ 0.41
Lysmd1Q9D0E3 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Lysmd1Q9D0E3 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lysmd1Q9D0E3 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Lysmd1Q9D0E3 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lysmd1Q9D0E3 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lysmd1Q9D0E3 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lysmd1Q9D0E3 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Lysmd1Q9D0E3 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lysmd1Q9D0E3 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lysmd1Q9D0E3 Gm7336-201ENSMUST00000107041 1232 ntBASIC17.63■□□□□ 0.41
Lysmd1Q9D0E3 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC17.63■□□□□ 0.41
Lysmd1Q9D0E3 Gm2308-201ENSMUST00000166539 1004 ntBASIC17.63■□□□□ 0.41
Lysmd1Q9D0E3 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lysmd1Q9D0E3 Gm18062-201ENSMUST00000208020 547 ntBASIC17.63■□□□□ 0.41
Lysmd1Q9D0E3 Gm18055-201ENSMUST00000208254 547 ntBASIC17.63■□□□□ 0.41
Lysmd1Q9D0E3 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC17.63■□□□□ 0.41
Lysmd1Q9D0E3 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lysmd1Q9D0E3 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lysmd1Q9D0E3 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lysmd1Q9D0E3 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lysmd1Q9D0E3 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC17.63■□□□□ 0.41
Lysmd1Q9D0E3 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.62■□□□□ 0.41
Lysmd1Q9D0E3 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Lysmd1Q9D0E3 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Lysmd1Q9D0E3 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC17.62■□□□□ 0.41
Lysmd1Q9D0E3 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lysmd1Q9D0E3 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lysmd1Q9D0E3 Gm13223-201ENSMUST00000118609 747 ntBASIC17.62■□□□□ 0.41
Lysmd1Q9D0E3 Gm24158-201ENSMUST00000175263 71 ntBASIC17.62■□□□□ 0.41
Lysmd1Q9D0E3 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Lysmd1Q9D0E3 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC17.62■□□□□ 0.41
Lysmd1Q9D0E3 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Lysmd1Q9D0E3 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Lysmd1Q9D0E3 Gm7730-201ENSMUST00000212486 454 ntBASIC17.62■□□□□ 0.41
Lysmd1Q9D0E3 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lysmd1Q9D0E3 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lysmd1Q9D0E3 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Lysmd1Q9D0E3 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Lysmd1Q9D0E3 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.62■□□□□ 0.41
Lysmd1Q9D0E3 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Lysmd1Q9D0E3 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lysmd1Q9D0E3 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Lysmd1Q9D0E3 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lysmd1Q9D0E3 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lysmd1Q9D0E3 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.61■□□□□ 0.41
Lysmd1Q9D0E3 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lysmd1Q9D0E3 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lysmd1Q9D0E3 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lysmd1Q9D0E3 Gm22065-201ENSMUST00000103753 110 ntBASIC17.61■□□□□ 0.41
Lysmd1Q9D0E3 Gm22066-201ENSMUST00000103761 110 ntBASIC17.61■□□□□ 0.41
Lysmd1Q9D0E3 Gm24932-201ENSMUST00000103763 110 ntBASIC17.61■□□□□ 0.41
Lysmd1Q9D0E3 Gm24115-201ENSMUST00000103799 110 ntBASIC17.61■□□□□ 0.41
Lysmd1Q9D0E3 Gm22190-201ENSMUST00000103827 110 ntBASIC17.61■□□□□ 0.41
Lysmd1Q9D0E3 Gm22191-201ENSMUST00000103831 110 ntBASIC17.61■□□□□ 0.41
Lysmd1Q9D0E3 Gm24721-201ENSMUST00000103849 110 ntBASIC17.61■□□□□ 0.41
Lysmd1Q9D0E3 Gm28018-201ENSMUST00000103869 110 ntBASIC17.61■□□□□ 0.41
Lysmd1Q9D0E3 Gm26399-201ENSMUST00000103937 110 ntBASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms