Protein–RNA interactions for Protein: Q9CZ28

Snf8, Vacuolar-sorting protein SNF8, mousemouse

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snf8Q9CZ28 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Snf8Q9CZ28 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Snf8Q9CZ28 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Snf8Q9CZ28 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Snf8Q9CZ28 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Snf8Q9CZ28 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Snf8Q9CZ28 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Snf8Q9CZ28 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Snf8Q9CZ28 Gm7638-201ENSMUST00000121348 967 ntBASIC17.05■□□□□ 0.32
Snf8Q9CZ28 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Snf8Q9CZ28 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Snf8Q9CZ28 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Snf8Q9CZ28 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Snf8Q9CZ28 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Snf8Q9CZ28 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Snf8Q9CZ28 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Snf8Q9CZ28 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Snf8Q9CZ28 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Snf8Q9CZ28 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Snf8Q9CZ28 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
Snf8Q9CZ28 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Snf8Q9CZ28 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Snf8Q9CZ28 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
Snf8Q9CZ28 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Snf8Q9CZ28 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Snf8Q9CZ28 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Snf8Q9CZ28 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC17.04■□□□□ 0.32
Snf8Q9CZ28 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Snf8Q9CZ28 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Snf8Q9CZ28 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Snf8Q9CZ28 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
Snf8Q9CZ28 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC17.04■□□□□ 0.32
Snf8Q9CZ28 Gm12669-201ENSMUST00000122162 1009 ntBASIC17.04■□□□□ 0.32
Snf8Q9CZ28 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Snf8Q9CZ28 Gm18958-201ENSMUST00000174258 762 ntBASIC17.04■□□□□ 0.32
Snf8Q9CZ28 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC17.04■□□□□ 0.32
Snf8Q9CZ28 Gm44878-201ENSMUST00000205812 1295 ntBASIC17.04■□□□□ 0.32
Snf8Q9CZ28 AC120002.2-201ENSMUST00000220205 773 ntBASIC17.04■□□□□ 0.32
Snf8Q9CZ28 Il3ra-202ENSMUST00000223589 738 ntBASIC17.04■□□□□ 0.32
Snf8Q9CZ28 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Snf8Q9CZ28 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Snf8Q9CZ28 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC17.04■□□□□ 0.32
Snf8Q9CZ28 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Snf8Q9CZ28 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Snf8Q9CZ28 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Snf8Q9CZ28 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Snf8Q9CZ28 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Snf8Q9CZ28 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC17.04■□□□□ 0.32
Snf8Q9CZ28 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC17.04■□□□□ 0.32
Snf8Q9CZ28 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Snf8Q9CZ28 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC17.03■□□□□ 0.32
Snf8Q9CZ28 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Snf8Q9CZ28 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Snf8Q9CZ28 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Snf8Q9CZ28 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Snf8Q9CZ28 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Snf8Q9CZ28 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Snf8Q9CZ28 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Snf8Q9CZ28 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Snf8Q9CZ28 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Snf8Q9CZ28 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Snf8Q9CZ28 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC17.03■□□□□ 0.32
Snf8Q9CZ28 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Snf8Q9CZ28 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Snf8Q9CZ28 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Snf8Q9CZ28 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Snf8Q9CZ28 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Snf8Q9CZ28 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Snf8Q9CZ28 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Snf8Q9CZ28 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC17.02■□□□□ 0.32
Snf8Q9CZ28 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Snf8Q9CZ28 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Snf8Q9CZ28 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Snf8Q9CZ28 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Snf8Q9CZ28 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Snf8Q9CZ28 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Snf8Q9CZ28 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Snf8Q9CZ28 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Snf8Q9CZ28 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Snf8Q9CZ28 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Snf8Q9CZ28 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Snf8Q9CZ28 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Snf8Q9CZ28 Gm12085-201ENSMUST00000119263 940 ntBASIC17.02■□□□□ 0.32
Snf8Q9CZ28 Gm15378-201ENSMUST00000121894 207 ntBASIC17.02■□□□□ 0.32
Snf8Q9CZ28 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Snf8Q9CZ28 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC17.02■□□□□ 0.32
Snf8Q9CZ28 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Snf8Q9CZ28 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Snf8Q9CZ28 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Snf8Q9CZ28 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Snf8Q9CZ28 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Snf8Q9CZ28 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Snf8Q9CZ28 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Snf8Q9CZ28 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC17.01■□□□□ 0.31
Snf8Q9CZ28 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Snf8Q9CZ28 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Snf8Q9CZ28 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Snf8Q9CZ28 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC17.01■□□□□ 0.31
Snf8Q9CZ28 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Snf8Q9CZ28 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms