Protein–RNA interactions for Protein: Q9CYQ5

Hcfc1r1, Host cell factor C1 regulator 1, mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcfc1r1Q9CYQ5 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hcfc1r1Q9CYQ5 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Hcfc1r1Q9CYQ5 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Hcfc1r1Q9CYQ5 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hcfc1r1Q9CYQ5 Gm12896-201ENSMUST00000118430 226 ntBASIC14.36□□□□□ -0.11
Hcfc1r1Q9CYQ5 Gm37292-201ENSMUST00000192062 758 ntBASIC14.36□□□□□ -0.11
Hcfc1r1Q9CYQ5 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hcfc1r1Q9CYQ5 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hcfc1r1Q9CYQ5 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hcfc1r1Q9CYQ5 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hcfc1r1Q9CYQ5 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hcfc1r1Q9CYQ5 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hcfc1r1Q9CYQ5 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hcfc1r1Q9CYQ5 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hcfc1r1Q9CYQ5 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hcfc1r1Q9CYQ5 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hcfc1r1Q9CYQ5 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hcfc1r1Q9CYQ5 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hcfc1r1Q9CYQ5 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hcfc1r1Q9CYQ5 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hcfc1r1Q9CYQ5 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Hcfc1r1Q9CYQ5 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hcfc1r1Q9CYQ5 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Hcfc1r1Q9CYQ5 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hcfc1r1Q9CYQ5 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hcfc1r1Q9CYQ5 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hcfc1r1Q9CYQ5 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Hcfc1r1Q9CYQ5 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hcfc1r1Q9CYQ5 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Hcfc1r1Q9CYQ5 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hcfc1r1Q9CYQ5 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hcfc1r1Q9CYQ5 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Hcfc1r1Q9CYQ5 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hcfc1r1Q9CYQ5 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Hcfc1r1Q9CYQ5 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hcfc1r1Q9CYQ5 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hcfc1r1Q9CYQ5 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hcfc1r1Q9CYQ5 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hcfc1r1Q9CYQ5 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hcfc1r1Q9CYQ5 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
Hcfc1r1Q9CYQ5 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hcfc1r1Q9CYQ5 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hcfc1r1Q9CYQ5 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hcfc1r1Q9CYQ5 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hcfc1r1Q9CYQ5 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hcfc1r1Q9CYQ5 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hcfc1r1Q9CYQ5 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC14.34□□□□□ -0.11
Hcfc1r1Q9CYQ5 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Hcfc1r1Q9CYQ5 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hcfc1r1Q9CYQ5 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hcfc1r1Q9CYQ5 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hcfc1r1Q9CYQ5 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hcfc1r1Q9CYQ5 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hcfc1r1Q9CYQ5 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hcfc1r1Q9CYQ5 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC14.34□□□□□ -0.11
Hcfc1r1Q9CYQ5 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hcfc1r1Q9CYQ5 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC14.34□□□□□ -0.11
Hcfc1r1Q9CYQ5 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hcfc1r1Q9CYQ5 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hcfc1r1Q9CYQ5 Gm21596-201ENSMUST00000178049 1316 ntBASIC14.34□□□□□ -0.11
Hcfc1r1Q9CYQ5 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hcfc1r1Q9CYQ5 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC14.34□□□□□ -0.11
Hcfc1r1Q9CYQ5 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Hcfc1r1Q9CYQ5 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.11
Hcfc1r1Q9CYQ5 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.11
Hcfc1r1Q9CYQ5 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Hcfc1r1Q9CYQ5 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Hcfc1r1Q9CYQ5 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Hcfc1r1Q9CYQ5 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Hcfc1r1Q9CYQ5 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Hcfc1r1Q9CYQ5 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Hcfc1r1Q9CYQ5 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hcfc1r1Q9CYQ5 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hcfc1r1Q9CYQ5 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hcfc1r1Q9CYQ5 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Hcfc1r1Q9CYQ5 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Hcfc1r1Q9CYQ5 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hcfc1r1Q9CYQ5 Gm17661-201ENSMUST00000170317 270 ntBASIC14.33□□□□□ -0.12
Hcfc1r1Q9CYQ5 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC14.33□□□□□ -0.12
Hcfc1r1Q9CYQ5 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hcfc1r1Q9CYQ5 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Hcfc1r1Q9CYQ5 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hcfc1r1Q9CYQ5 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hcfc1r1Q9CYQ5 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hcfc1r1Q9CYQ5 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hcfc1r1Q9CYQ5 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Hcfc1r1Q9CYQ5 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hcfc1r1Q9CYQ5 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hcfc1r1Q9CYQ5 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hcfc1r1Q9CYQ5 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hcfc1r1Q9CYQ5 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hcfc1r1Q9CYQ5 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hcfc1r1Q9CYQ5 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hcfc1r1Q9CYQ5 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hcfc1r1Q9CYQ5 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hcfc1r1Q9CYQ5 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hcfc1r1Q9CYQ5 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
Hcfc1r1Q9CYQ5 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Hcfc1r1Q9CYQ5 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Hcfc1r1Q9CYQ5 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms