Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim13Q9CYB0 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim13Q9CYB0 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim13Q9CYB0 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim13Q9CYB0 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim13Q9CYB0 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim13Q9CYB0 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trim13Q9CYB0 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trim13Q9CYB0 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC15.33■□□□□ 0.05
Trim13Q9CYB0 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trim13Q9CYB0 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim13Q9CYB0 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim13Q9CYB0 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Trim13Q9CYB0 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trim13Q9CYB0 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trim13Q9CYB0 Alkbh1-212ENSMUST00000185301 408 ntBASIC15.33■□□□□ 0.04
Trim13Q9CYB0 Gm44672-201ENSMUST00000206944 1098 ntBASIC15.33■□□□□ 0.04
Trim13Q9CYB0 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim13Q9CYB0 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim13Q9CYB0 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim13Q9CYB0 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim13Q9CYB0 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Trim13Q9CYB0 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim13Q9CYB0 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim13Q9CYB0 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC15.33■□□□□ 0.04
Trim13Q9CYB0 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim13Q9CYB0 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim13Q9CYB0 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Trim13Q9CYB0 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim13Q9CYB0 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trim13Q9CYB0 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Trim13Q9CYB0 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim13Q9CYB0 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim13Q9CYB0 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trim13Q9CYB0 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim13Q9CYB0 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trim13Q9CYB0 AC069562.2-201ENSMUST00000224644 2146 ntBASIC15.32■□□□□ 0.04
Trim13Q9CYB0 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim13Q9CYB0 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim13Q9CYB0 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim13Q9CYB0 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim13Q9CYB0 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC15.32■□□□□ 0.04
Trim13Q9CYB0 AC166341.7-201ENSMUST00000221698 126 ntBASIC15.32■□□□□ 0.04
Trim13Q9CYB0 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Trim13Q9CYB0 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim13Q9CYB0 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC15.32■□□□□ 0.04
Trim13Q9CYB0 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim13Q9CYB0 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim13Q9CYB0 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim13Q9CYB0 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim13Q9CYB0 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim13Q9CYB0 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim13Q9CYB0 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trim13Q9CYB0 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim13Q9CYB0 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim13Q9CYB0 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim13Q9CYB0 Dio3-201ENSMUST00000097228 1449 ntBASIC15.32■□□□□ 0.04
Trim13Q9CYB0 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim13Q9CYB0 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Trim13Q9CYB0 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim13Q9CYB0 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim13Q9CYB0 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC15.32■□□□□ 0.04
Trim13Q9CYB0 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim13Q9CYB0 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim13Q9CYB0 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Trim13Q9CYB0 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim13Q9CYB0 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC15.31■□□□□ 0.04
Trim13Q9CYB0 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim13Q9CYB0 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trim13Q9CYB0 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim13Q9CYB0 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trim13Q9CYB0 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC15.31■□□□□ 0.04
Trim13Q9CYB0 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim13Q9CYB0 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim13Q9CYB0 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Trim13Q9CYB0 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim13Q9CYB0 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Trim13Q9CYB0 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim13Q9CYB0 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC15.31■□□□□ 0.04
Trim13Q9CYB0 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC15.31■□□□□ 0.04
Trim13Q9CYB0 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim13Q9CYB0 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
Trim13Q9CYB0 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim13Q9CYB0 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim13Q9CYB0 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trim13Q9CYB0 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Trim13Q9CYB0 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim13Q9CYB0 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim13Q9CYB0 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim13Q9CYB0 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim13Q9CYB0 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim13Q9CYB0 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC15.3■□□□□ 0.04
Trim13Q9CYB0 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trim13Q9CYB0 AC107711.5-202ENSMUST00000226429 702 ntBASIC15.3■□□□□ 0.04
Trim13Q9CYB0 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim13Q9CYB0 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim13Q9CYB0 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim13Q9CYB0 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim13Q9CYB0 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trim13Q9CYB0 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms