Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Ssr1Q9CY50 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ssr1Q9CY50 Gm13168-201ENSMUST00000121771 632 ntBASIC17.94■□□□□ 0.46
Ssr1Q9CY50 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ssr1Q9CY50 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ssr1Q9CY50 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ssr1Q9CY50 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ssr1Q9CY50 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ssr1Q9CY50 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ssr1Q9CY50 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ssr1Q9CY50 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ssr1Q9CY50 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ssr1Q9CY50 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC17.94■□□□□ 0.46
Ssr1Q9CY50 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Ssr1Q9CY50 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ssr1Q9CY50 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ssr1Q9CY50 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ssr1Q9CY50 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ssr1Q9CY50 Gm7712-202ENSMUST00000222331 1510 ntBASIC17.93■□□□□ 0.46
Ssr1Q9CY50 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ssr1Q9CY50 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ssr1Q9CY50 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ssr1Q9CY50 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Ssr1Q9CY50 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ssr1Q9CY50 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ssr1Q9CY50 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ssr1Q9CY50 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Ssr1Q9CY50 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ssr1Q9CY50 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ssr1Q9CY50 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ssr1Q9CY50 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ssr1Q9CY50 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ssr1Q9CY50 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ssr1Q9CY50 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ssr1Q9CY50 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Ssr1Q9CY50 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ssr1Q9CY50 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ssr1Q9CY50 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC17.93■□□□□ 0.46
Ssr1Q9CY50 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Ssr1Q9CY50 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Ssr1Q9CY50 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ssr1Q9CY50 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ssr1Q9CY50 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ssr1Q9CY50 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Ssr1Q9CY50 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ssr1Q9CY50 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ssr1Q9CY50 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ssr1Q9CY50 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Ssr1Q9CY50 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ssr1Q9CY50 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ssr1Q9CY50 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ssr1Q9CY50 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ssr1Q9CY50 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Ssr1Q9CY50 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Ssr1Q9CY50 Gm36858-201ENSMUST00000194501 2391 ntBASIC17.92■□□□□ 0.46
Ssr1Q9CY50 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ssr1Q9CY50 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Ssr1Q9CY50 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ssr1Q9CY50 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ssr1Q9CY50 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ssr1Q9CY50 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ssr1Q9CY50 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ssr1Q9CY50 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Ssr1Q9CY50 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
Ssr1Q9CY50 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ssr1Q9CY50 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ssr1Q9CY50 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ssr1Q9CY50 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ssr1Q9CY50 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ssr1Q9CY50 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ssr1Q9CY50 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ssr1Q9CY50 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Ssr1Q9CY50 Mir1199-201ENSMUST00000117015 119 ntBASIC17.91■□□□□ 0.46
Ssr1Q9CY50 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC17.91■□□□□ 0.46
Ssr1Q9CY50 Gm17661-201ENSMUST00000170317 270 ntBASIC17.91■□□□□ 0.46
Ssr1Q9CY50 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ssr1Q9CY50 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Ssr1Q9CY50 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ssr1Q9CY50 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ssr1Q9CY50 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ssr1Q9CY50 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ssr1Q9CY50 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ssr1Q9CY50 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ssr1Q9CY50 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ssr1Q9CY50 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ssr1Q9CY50 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC17.91■□□□□ 0.46
Ssr1Q9CY50 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ssr1Q9CY50 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ssr1Q9CY50 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ssr1Q9CY50 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ssr1Q9CY50 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ssr1Q9CY50 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Ssr1Q9CY50 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Ssr1Q9CY50 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Ssr1Q9CY50 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ssr1Q9CY50 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
Ssr1Q9CY50 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
Ssr1Q9CY50 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ssr1Q9CY50 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ssr1Q9CY50 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms