Protein–RNA interactions for Protein: Q9CWX9

Ddx47, Probable ATP-dependent RNA helicase DDX47, mousemouse

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx47Q9CWX9 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ddx47Q9CWX9 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ddx47Q9CWX9 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC17.09■□□□□ 0.33
Ddx47Q9CWX9 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ddx47Q9CWX9 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ddx47Q9CWX9 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ddx47Q9CWX9 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ddx47Q9CWX9 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.33
Ddx47Q9CWX9 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Ddx47Q9CWX9 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ddx47Q9CWX9 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Ddx47Q9CWX9 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ddx47Q9CWX9 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ddx47Q9CWX9 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ddx47Q9CWX9 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ddx47Q9CWX9 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ddx47Q9CWX9 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Ddx47Q9CWX9 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC17.08■□□□□ 0.32
Ddx47Q9CWX9 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ddx47Q9CWX9 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ddx47Q9CWX9 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ddx47Q9CWX9 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ddx47Q9CWX9 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ddx47Q9CWX9 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ddx47Q9CWX9 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Ddx47Q9CWX9 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Ddx47Q9CWX9 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ddx47Q9CWX9 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ddx47Q9CWX9 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Ddx47Q9CWX9 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Ddx47Q9CWX9 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ddx47Q9CWX9 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ddx47Q9CWX9 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ddx47Q9CWX9 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ddx47Q9CWX9 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ddx47Q9CWX9 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ddx47Q9CWX9 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ddx47Q9CWX9 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ddx47Q9CWX9 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ddx47Q9CWX9 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Ddx47Q9CWX9 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
Ddx47Q9CWX9 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ddx47Q9CWX9 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Ddx47Q9CWX9 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ddx47Q9CWX9 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ddx47Q9CWX9 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Ddx47Q9CWX9 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ddx47Q9CWX9 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ddx47Q9CWX9 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ddx47Q9CWX9 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ddx47Q9CWX9 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ddx47Q9CWX9 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ddx47Q9CWX9 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ddx47Q9CWX9 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Ddx47Q9CWX9 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ddx47Q9CWX9 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ddx47Q9CWX9 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ddx47Q9CWX9 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ddx47Q9CWX9 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ddx47Q9CWX9 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC17.06■□□□□ 0.32
Ddx47Q9CWX9 Gm5408-201ENSMUST00000197998 747 ntBASIC17.06■□□□□ 0.32
Ddx47Q9CWX9 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC17.06■□□□□ 0.32
Ddx47Q9CWX9 Rab3c-203ENSMUST00000224180 967 ntBASIC17.06■□□□□ 0.32
Ddx47Q9CWX9 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ddx47Q9CWX9 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ddx47Q9CWX9 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ddx47Q9CWX9 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Ddx47Q9CWX9 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ddx47Q9CWX9 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ddx47Q9CWX9 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ddx47Q9CWX9 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ddx47Q9CWX9 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ddx47Q9CWX9 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ddx47Q9CWX9 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ddx47Q9CWX9 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ddx47Q9CWX9 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ddx47Q9CWX9 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ddx47Q9CWX9 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC17.05■□□□□ 0.32
Ddx47Q9CWX9 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ddx47Q9CWX9 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ddx47Q9CWX9 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Ddx47Q9CWX9 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ddx47Q9CWX9 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC17.05■□□□□ 0.32
Ddx47Q9CWX9 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ddx47Q9CWX9 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ddx47Q9CWX9 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC17.05■□□□□ 0.32
Ddx47Q9CWX9 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ddx47Q9CWX9 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ddx47Q9CWX9 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Ddx47Q9CWX9 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ddx47Q9CWX9 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC17.04■□□□□ 0.32
Ddx47Q9CWX9 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ddx47Q9CWX9 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ddx47Q9CWX9 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ddx47Q9CWX9 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ddx47Q9CWX9 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC17.04■□□□□ 0.32
Ddx47Q9CWX9 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ddx47Q9CWX9 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ddx47Q9CWX9 AC154412.1-201ENSMUST00000226540 2786 ntBASIC17.04■□□□□ 0.32
Ddx47Q9CWX9 Gm10849-201ENSMUST00000100397 618 ntBASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms