Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Cldnd1Q9CQX5 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Cldnd1Q9CQX5 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC16.93■□□□□ 0.3
Cldnd1Q9CQX5 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC16.93■□□□□ 0.3
Cldnd1Q9CQX5 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
Cldnd1Q9CQX5 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Cldnd1Q9CQX5 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cldnd1Q9CQX5 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cldnd1Q9CQX5 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Cldnd1Q9CQX5 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Cldnd1Q9CQX5 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cldnd1Q9CQX5 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cldnd1Q9CQX5 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC16.92■□□□□ 0.3
Cldnd1Q9CQX5 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Cldnd1Q9CQX5 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC16.92■□□□□ 0.3
Cldnd1Q9CQX5 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Cldnd1Q9CQX5 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC16.92■□□□□ 0.3
Cldnd1Q9CQX5 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cldnd1Q9CQX5 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC16.92■□□□□ 0.3
Cldnd1Q9CQX5 Gm8655-201ENSMUST00000221159 852 ntBASIC16.92■□□□□ 0.3
Cldnd1Q9CQX5 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cldnd1Q9CQX5 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cldnd1Q9CQX5 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Cldnd1Q9CQX5 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Cldnd1Q9CQX5 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cldnd1Q9CQX5 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cldnd1Q9CQX5 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cldnd1Q9CQX5 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cldnd1Q9CQX5 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cldnd1Q9CQX5 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cldnd1Q9CQX5 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Cldnd1Q9CQX5 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cldnd1Q9CQX5 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cldnd1Q9CQX5 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cldnd1Q9CQX5 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cldnd1Q9CQX5 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
Cldnd1Q9CQX5 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cldnd1Q9CQX5 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cldnd1Q9CQX5 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cldnd1Q9CQX5 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Cldnd1Q9CQX5 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cldnd1Q9CQX5 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Cldnd1Q9CQX5 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Cldnd1Q9CQX5 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cldnd1Q9CQX5 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cldnd1Q9CQX5 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cldnd1Q9CQX5 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cldnd1Q9CQX5 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC16.91■□□□□ 0.3
Cldnd1Q9CQX5 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cldnd1Q9CQX5 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cldnd1Q9CQX5 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cldnd1Q9CQX5 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cldnd1Q9CQX5 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Cldnd1Q9CQX5 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cldnd1Q9CQX5 Gm10175-201ENSMUST00000086013 645 ntBASIC16.9■□□□□ 0.3
Cldnd1Q9CQX5 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Cldnd1Q9CQX5 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cldnd1Q9CQX5 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Cldnd1Q9CQX5 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cldnd1Q9CQX5 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cldnd1Q9CQX5 Gm3928-201ENSMUST00000121141 1307 ntBASIC16.9■□□□□ 0.3
Cldnd1Q9CQX5 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Cldnd1Q9CQX5 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Cldnd1Q9CQX5 AL590614.2-201ENSMUST00000225374 1937 ntBASIC16.9■□□□□ 0.3
Cldnd1Q9CQX5 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cldnd1Q9CQX5 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Cldnd1Q9CQX5 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
Cldnd1Q9CQX5 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Cldnd1Q9CQX5 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC16.89■□□□□ 0.29
Cldnd1Q9CQX5 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Cldnd1Q9CQX5 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cldnd1Q9CQX5 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC16.89■□□□□ 0.29
Cldnd1Q9CQX5 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cldnd1Q9CQX5 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cldnd1Q9CQX5 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Cldnd1Q9CQX5 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Cldnd1Q9CQX5 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC16.89■□□□□ 0.29
Cldnd1Q9CQX5 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
Cldnd1Q9CQX5 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cldnd1Q9CQX5 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cldnd1Q9CQX5 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC16.89■□□□□ 0.29
Cldnd1Q9CQX5 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC16.89■□□□□ 0.29
Cldnd1Q9CQX5 Bloc1s5-203ENSMUST00000224902 612 ntBASIC16.89■□□□□ 0.29
Cldnd1Q9CQX5 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Cldnd1Q9CQX5 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cldnd1Q9CQX5 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cldnd1Q9CQX5 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cldnd1Q9CQX5 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cldnd1Q9CQX5 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cldnd1Q9CQX5 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cldnd1Q9CQX5 Mir3113-201ENSMUST00000175478 76 ntBASIC16.88■□□□□ 0.29
Cldnd1Q9CQX5 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Cldnd1Q9CQX5 AC084391.1-201ENSMUST00000200651 141 ntBASIC16.88■□□□□ 0.29
Cldnd1Q9CQX5 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cldnd1Q9CQX5 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cldnd1Q9CQX5 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC16.88■□□□□ 0.29
Cldnd1Q9CQX5 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cldnd1Q9CQX5 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
Cldnd1Q9CQX5 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cldnd1Q9CQX5 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms