Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lsm7Q9CQQ8 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lsm7Q9CQQ8 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lsm7Q9CQQ8 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC16.72■□□□□ 0.27
Lsm7Q9CQQ8 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lsm7Q9CQQ8 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lsm7Q9CQQ8 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lsm7Q9CQQ8 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lsm7Q9CQQ8 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lsm7Q9CQQ8 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Lsm7Q9CQQ8 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lsm7Q9CQQ8 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lsm7Q9CQQ8 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lsm7Q9CQQ8 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lsm7Q9CQQ8 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lsm7Q9CQQ8 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lsm7Q9CQQ8 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC16.72■□□□□ 0.27
Lsm7Q9CQQ8 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lsm7Q9CQQ8 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
Lsm7Q9CQQ8 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Lsm7Q9CQQ8 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Lsm7Q9CQQ8 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Lsm7Q9CQQ8 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Lsm7Q9CQQ8 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC16.71■□□□□ 0.27
Lsm7Q9CQQ8 Gm10052-201ENSMUST00000168019 960 ntBASIC16.71■□□□□ 0.27
Lsm7Q9CQQ8 Gm27741-201ENSMUST00000185060 237 ntBASIC16.71■□□□□ 0.27
Lsm7Q9CQQ8 Gm7729-201ENSMUST00000050143 801 ntBASIC16.71■□□□□ 0.27
Lsm7Q9CQQ8 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Lsm7Q9CQQ8 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Lsm7Q9CQQ8 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Lsm7Q9CQQ8 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Lsm7Q9CQQ8 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Lsm7Q9CQQ8 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Lsm7Q9CQQ8 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Lsm7Q9CQQ8 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
Lsm7Q9CQQ8 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Lsm7Q9CQQ8 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Lsm7Q9CQQ8 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC16.7■□□□□ 0.26
Lsm7Q9CQQ8 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Lsm7Q9CQQ8 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Lsm7Q9CQQ8 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Lsm7Q9CQQ8 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Lsm7Q9CQQ8 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Lsm7Q9CQQ8 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Lsm7Q9CQQ8 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Lsm7Q9CQQ8 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Lsm7Q9CQQ8 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Lsm7Q9CQQ8 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Lsm7Q9CQQ8 Gm17971-201ENSMUST00000190239 806 ntBASIC16.7■□□□□ 0.26
Lsm7Q9CQQ8 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC16.7■□□□□ 0.26
Lsm7Q9CQQ8 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
Lsm7Q9CQQ8 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
Lsm7Q9CQQ8 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Lsm7Q9CQQ8 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Lsm7Q9CQQ8 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Lsm7Q9CQQ8 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Lsm7Q9CQQ8 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC16.7■□□□□ 0.26
Lsm7Q9CQQ8 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Lsm7Q9CQQ8 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Lsm7Q9CQQ8 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC16.69■□□□□ 0.26
Lsm7Q9CQQ8 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Lsm7Q9CQQ8 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Lsm7Q9CQQ8 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC16.69■□□□□ 0.26
Lsm7Q9CQQ8 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Lsm7Q9CQQ8 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC16.69■□□□□ 0.26
Lsm7Q9CQQ8 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Lsm7Q9CQQ8 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Lsm7Q9CQQ8 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Lsm7Q9CQQ8 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Lsm7Q9CQQ8 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Lsm7Q9CQQ8 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Lsm7Q9CQQ8 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Lsm7Q9CQQ8 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Lsm7Q9CQQ8 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
Lsm7Q9CQQ8 Gm43702-201ENSMUST00000198772 2546 ntBASIC16.68■□□□□ 0.26
Lsm7Q9CQQ8 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lsm7Q9CQQ8 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lsm7Q9CQQ8 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC16.68■□□□□ 0.26
Lsm7Q9CQQ8 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC16.68■□□□□ 0.26
Lsm7Q9CQQ8 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC16.68■□□□□ 0.26
Lsm7Q9CQQ8 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC16.68■□□□□ 0.26
Lsm7Q9CQQ8 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lsm7Q9CQQ8 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lsm7Q9CQQ8 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lsm7Q9CQQ8 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lsm7Q9CQQ8 Gm45606-201ENSMUST00000209836 2795 ntBASIC16.68■□□□□ 0.26
Lsm7Q9CQQ8 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lsm7Q9CQQ8 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lsm7Q9CQQ8 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lsm7Q9CQQ8 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Lsm7Q9CQQ8 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Lsm7Q9CQQ8 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Lsm7Q9CQQ8 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Lsm7Q9CQQ8 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Lsm7Q9CQQ8 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Lsm7Q9CQQ8 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Lsm7Q9CQQ8 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC16.67■□□□□ 0.26
Lsm7Q9CQQ8 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Lsm7Q9CQQ8 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Lsm7Q9CQQ8 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms