Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Gm16061-201ENSMUST00000122167 857 ntBASIC18.86■□□□□ 0.61
Trim11Q99PQ2 Gm7370-201ENSMUST00000219471 767 ntBASIC18.86■□□□□ 0.61
Trim11Q99PQ2 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Trim11Q99PQ2 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim11Q99PQ2 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim11Q99PQ2 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Trim11Q99PQ2 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim11Q99PQ2 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Trim11Q99PQ2 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim11Q99PQ2 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim11Q99PQ2 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim11Q99PQ2 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Trim11Q99PQ2 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Trim11Q99PQ2 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim11Q99PQ2 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Trim11Q99PQ2 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim11Q99PQ2 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim11Q99PQ2 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Trim11Q99PQ2 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Trim11Q99PQ2 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim11Q99PQ2 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Trim11Q99PQ2 Gm13474-201ENSMUST00000122466 815 ntBASIC18.85■□□□□ 0.61
Trim11Q99PQ2 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Trim11Q99PQ2 AL672049.1-201ENSMUST00000197943 91 ntBASIC18.85■□□□□ 0.61
Trim11Q99PQ2 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC18.85■□□□□ 0.61
Trim11Q99PQ2 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Trim11Q99PQ2 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim11Q99PQ2 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Trim11Q99PQ2 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim11Q99PQ2 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Trim11Q99PQ2 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim11Q99PQ2 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Trim11Q99PQ2 Actl10-202ENSMUST00000226583 1501 ntBASIC18.84■□□□□ 0.61
Trim11Q99PQ2 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim11Q99PQ2 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim11Q99PQ2 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim11Q99PQ2 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Trim11Q99PQ2 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim11Q99PQ2 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC18.84■□□□□ 0.61
Trim11Q99PQ2 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC18.84■□□□□ 0.61
Trim11Q99PQ2 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim11Q99PQ2 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Trim11Q99PQ2 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Trim11Q99PQ2 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC18.84■□□□□ 0.61
Trim11Q99PQ2 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim11Q99PQ2 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim11Q99PQ2 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trim11Q99PQ2 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trim11Q99PQ2 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC18.83■□□□□ 0.61
Trim11Q99PQ2 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trim11Q99PQ2 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trim11Q99PQ2 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC18.83■□□□□ 0.61
Trim11Q99PQ2 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Trim11Q99PQ2 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim11Q99PQ2 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC18.83■□□□□ 0.6
Trim11Q99PQ2 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim11Q99PQ2 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim11Q99PQ2 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim11Q99PQ2 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim11Q99PQ2 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Trim11Q99PQ2 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim11Q99PQ2 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim11Q99PQ2 Phf7-203ENSMUST00000226565 1971 ntBASIC18.82■□□□□ 0.6
Trim11Q99PQ2 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim11Q99PQ2 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim11Q99PQ2 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim11Q99PQ2 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Trim11Q99PQ2 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Trim11Q99PQ2 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim11Q99PQ2 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim11Q99PQ2 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim11Q99PQ2 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC18.82■□□□□ 0.6
Trim11Q99PQ2 Gm13436-201ENSMUST00000120418 567 ntBASIC18.82■□□□□ 0.6
Trim11Q99PQ2 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC18.82■□□□□ 0.6
Trim11Q99PQ2 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Trim11Q99PQ2 Gm18115-201ENSMUST00000221209 621 ntBASIC18.82■□□□□ 0.6
Trim11Q99PQ2 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim11Q99PQ2 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim11Q99PQ2 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim11Q99PQ2 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim11Q99PQ2 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Trim11Q99PQ2 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim11Q99PQ2 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim11Q99PQ2 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim11Q99PQ2 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim11Q99PQ2 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim11Q99PQ2 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Trim11Q99PQ2 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Trim11Q99PQ2 Spsb2-203ENSMUST00000112473 1322 ntBASIC18.81■□□□□ 0.6
Trim11Q99PQ2 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Trim11Q99PQ2 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim11Q99PQ2 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC18.81■□□□□ 0.6
Trim11Q99PQ2 Gm20472-201ENSMUST00000174403 1240 ntBASIC18.81■□□□□ 0.6
Trim11Q99PQ2 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Trim11Q99PQ2 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC18.81■□□□□ 0.6
Trim11Q99PQ2 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
Trim11Q99PQ2 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Trim11Q99PQ2 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Trim11Q99PQ2 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim11Q99PQ2 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms