Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC16.4■□□□□ 0.22
Trim33Q99PP7 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim33Q99PP7 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC16.4■□□□□ 0.22
Trim33Q99PP7 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trim33Q99PP7 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Trim33Q99PP7 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim33Q99PP7 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC16.4■□□□□ 0.22
Trim33Q99PP7 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim33Q99PP7 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Trim33Q99PP7 Gm13836-201ENSMUST00000121159 501 ntBASIC16.4■□□□□ 0.22
Trim33Q99PP7 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim33Q99PP7 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trim33Q99PP7 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim33Q99PP7 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trim33Q99PP7 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Trim33Q99PP7 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim33Q99PP7 AL590614.2-201ENSMUST00000225374 1937 ntBASIC16.4■□□□□ 0.22
Trim33Q99PP7 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim33Q99PP7 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim33Q99PP7 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Trim33Q99PP7 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC16.4■□□□□ 0.22
Trim33Q99PP7 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC16.4■□□□□ 0.22
Trim33Q99PP7 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
Trim33Q99PP7 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trim33Q99PP7 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Trim33Q99PP7 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Trim33Q99PP7 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim33Q99PP7 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trim33Q99PP7 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim33Q99PP7 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trim33Q99PP7 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trim33Q99PP7 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim33Q99PP7 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim33Q99PP7 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Trim33Q99PP7 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim33Q99PP7 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim33Q99PP7 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC16.39■□□□□ 0.21
Trim33Q99PP7 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Trim33Q99PP7 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim33Q99PP7 AC134329.2-201ENSMUST00000217897 428 ntBASIC16.39■□□□□ 0.21
Trim33Q99PP7 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim33Q99PP7 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim33Q99PP7 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim33Q99PP7 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Trim33Q99PP7 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim33Q99PP7 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trim33Q99PP7 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim33Q99PP7 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Trim33Q99PP7 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim33Q99PP7 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trim33Q99PP7 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Trim33Q99PP7 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC16.39■□□□□ 0.21
Trim33Q99PP7 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
Trim33Q99PP7 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim33Q99PP7 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trim33Q99PP7 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim33Q99PP7 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Trim33Q99PP7 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trim33Q99PP7 Gm26917-202ENSMUST00000192833 3329 ntBASIC16.38■□□□□ 0.21
Trim33Q99PP7 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
Trim33Q99PP7 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
Trim33Q99PP7 Gm28265-201ENSMUST00000188201 2319 ntBASIC16.38■□□□□ 0.21
Trim33Q99PP7 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
Trim33Q99PP7 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC16.38■□□□□ 0.21
Trim33Q99PP7 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC16.38■□□□□ 0.21
Trim33Q99PP7 Mir1668-201ENSMUST00000184114 107 ntBASIC16.38■□□□□ 0.21
Trim33Q99PP7 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trim33Q99PP7 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim33Q99PP7 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim33Q99PP7 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim33Q99PP7 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Trim33Q99PP7 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim33Q99PP7 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim33Q99PP7 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trim33Q99PP7 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim33Q99PP7 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim33Q99PP7 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim33Q99PP7 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim33Q99PP7 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Trim33Q99PP7 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trim33Q99PP7 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim33Q99PP7 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim33Q99PP7 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Trim33Q99PP7 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim33Q99PP7 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim33Q99PP7 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC16.37■□□□□ 0.21
Trim33Q99PP7 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Trim33Q99PP7 Gm18032-201ENSMUST00000222541 538 ntBASIC16.37■□□□□ 0.21
Trim33Q99PP7 AC121577.1-201ENSMUST00000227302 707 ntBASIC16.37■□□□□ 0.21
Trim33Q99PP7 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim33Q99PP7 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim33Q99PP7 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim33Q99PP7 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim33Q99PP7 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC16.37■□□□□ 0.21
Trim33Q99PP7 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim33Q99PP7 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trim33Q99PP7 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
Trim33Q99PP7 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim33Q99PP7 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trim33Q99PP7 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms