Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cdh23Q99PF4 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC16.82■□□□□ 0.28
Cdh23Q99PF4 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cdh23Q99PF4 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC16.81■□□□□ 0.28
Cdh23Q99PF4 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Cdh23Q99PF4 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
Cdh23Q99PF4 Gm8349-201ENSMUST00000182720 1003 ntBASIC16.81■□□□□ 0.28
Cdh23Q99PF4 Gm13332-201ENSMUST00000120451 1398 ntBASIC16.81■□□□□ 0.28
Cdh23Q99PF4 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cdh23Q99PF4 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cdh23Q99PF4 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cdh23Q99PF4 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Cdh23Q99PF4 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cdh23Q99PF4 Gm7222-201ENSMUST00000117512 906 ntBASIC16.81■□□□□ 0.28
Cdh23Q99PF4 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC16.81■□□□□ 0.28
Cdh23Q99PF4 Arhgef33-209ENSMUST00000225223 714 ntBASIC16.81■□□□□ 0.28
Cdh23Q99PF4 AC159295.1-201ENSMUST00000225326 940 ntBASIC16.81■□□□□ 0.28
Cdh23Q99PF4 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Cdh23Q99PF4 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Cdh23Q99PF4 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cdh23Q99PF4 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Cdh23Q99PF4 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cdh23Q99PF4 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cdh23Q99PF4 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC16.81■□□□□ 0.28
Cdh23Q99PF4 Gm12497-201ENSMUST00000138778 237 ntBASIC16.8■□□□□ 0.28
Cdh23Q99PF4 Gm5312-201ENSMUST00000203728 547 ntBASIC16.8■□□□□ 0.28
Cdh23Q99PF4 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cdh23Q99PF4 Gm6627-201ENSMUST00000218299 2386 ntBASIC16.8■□□□□ 0.28
Cdh23Q99PF4 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Cdh23Q99PF4 Gm27300-201ENSMUST00000184085 97 ntBASIC16.8■□□□□ 0.28
Cdh23Q99PF4 Gm27335-201ENSMUST00000184758 97 ntBASIC16.8■□□□□ 0.28
Cdh23Q99PF4 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Cdh23Q99PF4 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Cdh23Q99PF4 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cdh23Q99PF4 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cdh23Q99PF4 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cdh23Q99PF4 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cdh23Q99PF4 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cdh23Q99PF4 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cdh23Q99PF4 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Cdh23Q99PF4 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Cdh23Q99PF4 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cdh23Q99PF4 Slc35b2-202ENSMUST00000223987 1766 ntBASIC16.79■□□□□ 0.28
Cdh23Q99PF4 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cdh23Q99PF4 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC16.79■□□□□ 0.28
Cdh23Q99PF4 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
Cdh23Q99PF4 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC16.79■□□□□ 0.28
Cdh23Q99PF4 Gm42939-201ENSMUST00000197514 2205 ntBASIC16.79■□□□□ 0.28
Cdh23Q99PF4 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cdh23Q99PF4 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Cdh23Q99PF4 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC16.79■□□□□ 0.28
Cdh23Q99PF4 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Cdh23Q99PF4 AC154572.2-201ENSMUST00000225105 997 ntBASIC16.79■□□□□ 0.28
Cdh23Q99PF4 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cdh23Q99PF4 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cdh23Q99PF4 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Cdh23Q99PF4 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cdh23Q99PF4 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cdh23Q99PF4 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC16.79■□□□□ 0.28
Cdh23Q99PF4 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cdh23Q99PF4 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cdh23Q99PF4 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cdh23Q99PF4 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC16.79■□□□□ 0.28
Cdh23Q99PF4 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC16.79■□□□□ 0.28
Cdh23Q99PF4 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cdh23Q99PF4 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cdh23Q99PF4 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cdh23Q99PF4 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Cdh23Q99PF4 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Cdh23Q99PF4 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Cdh23Q99PF4 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cdh23Q99PF4 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC16.78■□□□□ 0.28
Cdh23Q99PF4 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Cdh23Q99PF4 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cdh23Q99PF4 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cdh23Q99PF4 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cdh23Q99PF4 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC16.78■□□□□ 0.28
Cdh23Q99PF4 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cdh23Q99PF4 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC16.78■□□□□ 0.28
Cdh23Q99PF4 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cdh23Q99PF4 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cdh23Q99PF4 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cdh23Q99PF4 Mir7023-201ENSMUST00000185093 64 ntBASIC16.78■□□□□ 0.28
Cdh23Q99PF4 Gm43767-201ENSMUST00000198933 381 ntBASIC16.78■□□□□ 0.28
Cdh23Q99PF4 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cdh23Q99PF4 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cdh23Q99PF4 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cdh23Q99PF4 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC16.77■□□□□ 0.28
Cdh23Q99PF4 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Cdh23Q99PF4 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC16.77■□□□□ 0.28
Cdh23Q99PF4 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cdh23Q99PF4 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cdh23Q99PF4 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Cdh23Q99PF4 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Cdh23Q99PF4 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC16.77■□□□□ 0.28
Cdh23Q99PF4 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Cdh23Q99PF4 Gfra2-202ENSMUST00000227633 1480 ntBASIC16.77■□□□□ 0.27
Cdh23Q99PF4 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cdh23Q99PF4 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cdh23Q99PF4 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms