Protein–RNA interactions for Protein: Q99PE5

Smim3, Small integral membrane protein 3, mousemouse

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim3Q99PE5 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Smim3Q99PE5 Mir2861-201ENSMUST00000175539 82 ntBASIC14.18□□□□□ -0.14
Smim3Q99PE5 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC14.18□□□□□ -0.14
Smim3Q99PE5 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Smim3Q99PE5 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Smim3Q99PE5 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smim3Q99PE5 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Smim3Q99PE5 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smim3Q99PE5 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smim3Q99PE5 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smim3Q99PE5 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smim3Q99PE5 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC14.18□□□□□ -0.14
Smim3Q99PE5 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Smim3Q99PE5 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smim3Q99PE5 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smim3Q99PE5 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smim3Q99PE5 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smim3Q99PE5 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smim3Q99PE5 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smim3Q99PE5 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smim3Q99PE5 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Smim3Q99PE5 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smim3Q99PE5 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smim3Q99PE5 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smim3Q99PE5 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smim3Q99PE5 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Smim3Q99PE5 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smim3Q99PE5 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smim3Q99PE5 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC14.17□□□□□ -0.14
Smim3Q99PE5 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Smim3Q99PE5 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Smim3Q99PE5 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smim3Q99PE5 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smim3Q99PE5 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Smim3Q99PE5 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smim3Q99PE5 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smim3Q99PE5 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smim3Q99PE5 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smim3Q99PE5 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smim3Q99PE5 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Smim3Q99PE5 Gm13509-201ENSMUST00000119733 1308 ntBASIC14.16□□□□□ -0.14
Smim3Q99PE5 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smim3Q99PE5 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Smim3Q99PE5 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smim3Q99PE5 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smim3Q99PE5 AC154412.1-201ENSMUST00000226540 2786 ntBASIC14.16□□□□□ -0.14
Smim3Q99PE5 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smim3Q99PE5 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smim3Q99PE5 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC14.16□□□□□ -0.14
Smim3Q99PE5 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smim3Q99PE5 Gm42778-201ENSMUST00000199644 553 ntBASIC14.16□□□□□ -0.14
Smim3Q99PE5 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smim3Q99PE5 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smim3Q99PE5 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smim3Q99PE5 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smim3Q99PE5 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Smim3Q99PE5 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Smim3Q99PE5 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Smim3Q99PE5 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smim3Q99PE5 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
Smim3Q99PE5 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smim3Q99PE5 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smim3Q99PE5 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Smim3Q99PE5 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smim3Q99PE5 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Smim3Q99PE5 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smim3Q99PE5 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smim3Q99PE5 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smim3Q99PE5 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smim3Q99PE5 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Smim3Q99PE5 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smim3Q99PE5 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC14.15□□□□□ -0.14
Smim3Q99PE5 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Smim3Q99PE5 Gm43072-201ENSMUST00000200283 1671 ntBASIC14.15□□□□□ -0.14
Smim3Q99PE5 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Smim3Q99PE5 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Smim3Q99PE5 Gm2399-201ENSMUST00000104944 225 ntBASIC14.15□□□□□ -0.14
Smim3Q99PE5 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Smim3Q99PE5 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smim3Q99PE5 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC14.15□□□□□ -0.14
Smim3Q99PE5 Ap3s1-204ENSMUST00000225520 957 ntBASIC14.15□□□□□ -0.14
Smim3Q99PE5 Zfp783-201ENSMUST00000095946 670 ntBASIC14.15□□□□□ -0.14
Smim3Q99PE5 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smim3Q99PE5 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smim3Q99PE5 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smim3Q99PE5 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Smim3Q99PE5 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Smim3Q99PE5 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smim3Q99PE5 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Smim3Q99PE5 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smim3Q99PE5 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smim3Q99PE5 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Smim3Q99PE5 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
Smim3Q99PE5 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
Smim3Q99PE5 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smim3Q99PE5 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Smim3Q99PE5 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Smim3Q99PE5 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smim3Q99PE5 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smim3Q99PE5 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms