Protein–RNA interactions for Protein: Q99N13

Hdac9, Histone deacetylase 9, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac9Q99N13 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hdac9Q99N13 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Hdac9Q99N13 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Hdac9Q99N13 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
Hdac9Q99N13 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC19.43■□□□□ 0.7
Hdac9Q99N13 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hdac9Q99N13 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Hdac9Q99N13 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hdac9Q99N13 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hdac9Q99N13 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
Hdac9Q99N13 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC19.43■□□□□ 0.7
Hdac9Q99N13 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
Hdac9Q99N13 Gm4535-201ENSMUST00000182274 558 ntBASIC19.43■□□□□ 0.7
Hdac9Q99N13 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hdac9Q99N13 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hdac9Q99N13 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hdac9Q99N13 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Hdac9Q99N13 Gm10355-201ENSMUST00000097146 517 ntBASIC19.43■□□□□ 0.7
Hdac9Q99N13 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hdac9Q99N13 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hdac9Q99N13 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC19.43■□□□□ 0.7
Hdac9Q99N13 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Hdac9Q99N13 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hdac9Q99N13 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hdac9Q99N13 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hdac9Q99N13 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hdac9Q99N13 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
Hdac9Q99N13 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Hdac9Q99N13 Gm25990-201ENSMUST00000102440 86 ntBASIC19.42■□□□□ 0.7
Hdac9Q99N13 Gm11594-201ENSMUST00000122313 162 ntBASIC19.42■□□□□ 0.7
Hdac9Q99N13 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Hdac9Q99N13 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Hdac9Q99N13 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC19.42■□□□□ 0.7
Hdac9Q99N13 Gm7506-201ENSMUST00000207758 815 ntBASIC19.42■□□□□ 0.7
Hdac9Q99N13 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hdac9Q99N13 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hdac9Q99N13 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hdac9Q99N13 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Hdac9Q99N13 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hdac9Q99N13 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Hdac9Q99N13 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC19.42■□□□□ 0.7
Hdac9Q99N13 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC19.42■□□□□ 0.7
Hdac9Q99N13 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hdac9Q99N13 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hdac9Q99N13 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hdac9Q99N13 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hdac9Q99N13 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Hdac9Q99N13 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hdac9Q99N13 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Hdac9Q99N13 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hdac9Q99N13 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hdac9Q99N13 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Hdac9Q99N13 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Hdac9Q99N13 AC154527.4-201ENSMUST00000224364 1667 ntBASIC19.41■□□□□ 0.7
Hdac9Q99N13 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
Hdac9Q99N13 Gm7230-201ENSMUST00000173026 815 ntBASIC19.41■□□□□ 0.7
Hdac9Q99N13 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC19.41■□□□□ 0.7
Hdac9Q99N13 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Hdac9Q99N13 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hdac9Q99N13 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Hdac9Q99N13 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hdac9Q99N13 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hdac9Q99N13 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hdac9Q99N13 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hdac9Q99N13 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Hdac9Q99N13 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Hdac9Q99N13 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC19.4■□□□□ 0.7
Hdac9Q99N13 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hdac9Q99N13 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Hdac9Q99N13 Gm13418-201ENSMUST00000119097 944 ntBASIC19.4■□□□□ 0.7
Hdac9Q99N13 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Hdac9Q99N13 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC19.4■□□□□ 0.7
Hdac9Q99N13 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hdac9Q99N13 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Hdac9Q99N13 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hdac9Q99N13 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hdac9Q99N13 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hdac9Q99N13 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Hdac9Q99N13 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC19.4■□□□□ 0.7
Hdac9Q99N13 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hdac9Q99N13 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hdac9Q99N13 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hdac9Q99N13 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Hdac9Q99N13 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hdac9Q99N13 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hdac9Q99N13 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hdac9Q99N13 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
Hdac9Q99N13 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC19.39■□□□□ 0.7
Hdac9Q99N13 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.7
Hdac9Q99N13 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Hdac9Q99N13 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hdac9Q99N13 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hdac9Q99N13 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hdac9Q99N13 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC19.39■□□□□ 0.69
Hdac9Q99N13 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC19.39■□□□□ 0.69
Hdac9Q99N13 Gm43332-201ENSMUST00000202511 1044 ntBASIC19.39■□□□□ 0.69
Hdac9Q99N13 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hdac9Q99N13 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hdac9Q99N13 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hdac9Q99N13 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms