Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.11■□□□□ 0.33
Col25a1Q99MQ5 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Col25a1Q99MQ5 Gm13036-201ENSMUST00000117799 748 ntBASIC17.11■□□□□ 0.33
Col25a1Q99MQ5 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col25a1Q99MQ5 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Col25a1Q99MQ5 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col25a1Q99MQ5 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Col25a1Q99MQ5 Gm4535-201ENSMUST00000182274 558 ntBASIC17.11■□□□□ 0.33
Col25a1Q99MQ5 Mir8117-201ENSMUST00000184773 107 ntBASIC17.11■□□□□ 0.33
Col25a1Q99MQ5 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col25a1Q99MQ5 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col25a1Q99MQ5 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col25a1Q99MQ5 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col25a1Q99MQ5 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Col25a1Q99MQ5 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col25a1Q99MQ5 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.11■□□□□ 0.33
Col25a1Q99MQ5 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col25a1Q99MQ5 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Col25a1Q99MQ5 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col25a1Q99MQ5 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Col25a1Q99MQ5 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col25a1Q99MQ5 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Col25a1Q99MQ5 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Col25a1Q99MQ5 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col25a1Q99MQ5 Rbfox2-207ENSMUST00000227533 1041 ntBASIC17.1■□□□□ 0.33
Col25a1Q99MQ5 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col25a1Q99MQ5 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col25a1Q99MQ5 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col25a1Q99MQ5 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col25a1Q99MQ5 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col25a1Q99MQ5 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Col25a1Q99MQ5 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.1■□□□□ 0.33
Col25a1Q99MQ5 Gm37374-201ENSMUST00000194954 1829 ntBASIC17.1■□□□□ 0.33
Col25a1Q99MQ5 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col25a1Q99MQ5 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.09■□□□□ 0.33
Col25a1Q99MQ5 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col25a1Q99MQ5 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.09■□□□□ 0.33
Col25a1Q99MQ5 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Col25a1Q99MQ5 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Col25a1Q99MQ5 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Col25a1Q99MQ5 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col25a1Q99MQ5 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col25a1Q99MQ5 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col25a1Q99MQ5 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Col25a1Q99MQ5 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Col25a1Q99MQ5 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col25a1Q99MQ5 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col25a1Q99MQ5 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Col25a1Q99MQ5 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Col25a1Q99MQ5 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Col25a1Q99MQ5 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col25a1Q99MQ5 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.09■□□□□ 0.33
Col25a1Q99MQ5 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col25a1Q99MQ5 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col25a1Q99MQ5 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Col25a1Q99MQ5 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Col25a1Q99MQ5 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Col25a1Q99MQ5 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Col25a1Q99MQ5 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Col25a1Q99MQ5 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.08■□□□□ 0.33
Col25a1Q99MQ5 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Col25a1Q99MQ5 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Col25a1Q99MQ5 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC17.08■□□□□ 0.32
Col25a1Q99MQ5 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Col25a1Q99MQ5 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Col25a1Q99MQ5 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC17.08■□□□□ 0.32
Col25a1Q99MQ5 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC17.08■□□□□ 0.32
Col25a1Q99MQ5 Gm11780-201ENSMUST00000136880 516 ntBASIC17.08■□□□□ 0.32
Col25a1Q99MQ5 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC17.08■□□□□ 0.32
Col25a1Q99MQ5 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC17.08■□□□□ 0.32
Col25a1Q99MQ5 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Col25a1Q99MQ5 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Col25a1Q99MQ5 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Col25a1Q99MQ5 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC17.08■□□□□ 0.32
Col25a1Q99MQ5 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Col25a1Q99MQ5 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Col25a1Q99MQ5 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
Col25a1Q99MQ5 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Col25a1Q99MQ5 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Col25a1Q99MQ5 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Col25a1Q99MQ5 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Col25a1Q99MQ5 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col25a1Q99MQ5 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC17.07■□□□□ 0.32
Col25a1Q99MQ5 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.07■□□□□ 0.32
Col25a1Q99MQ5 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Col25a1Q99MQ5 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.07■□□□□ 0.32
Col25a1Q99MQ5 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Col25a1Q99MQ5 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col25a1Q99MQ5 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col25a1Q99MQ5 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Col25a1Q99MQ5 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC17.07■□□□□ 0.32
Col25a1Q99MQ5 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC17.07■□□□□ 0.32
Col25a1Q99MQ5 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC17.07■□□□□ 0.32
Col25a1Q99MQ5 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col25a1Q99MQ5 Gm6550-201ENSMUST00000187574 993 ntBASIC17.07■□□□□ 0.32
Col25a1Q99MQ5 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.07■□□□□ 0.32
Col25a1Q99MQ5 Gm37820-201ENSMUST00000194021 2147 ntBASIC17.07■□□□□ 0.32
Col25a1Q99MQ5 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC17.07■□□□□ 0.32
Col25a1Q99MQ5 AC174742.1-201ENSMUST00000218272 304 ntBASIC17.07■□□□□ 0.32
Col25a1Q99MQ5 Rassf8-202ENSMUST00000058538 1131 ntBASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms