Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Gm5297-201ENSMUST00000198555 1171 ntBASIC17.16■□□□□ 0.34
Cdk5rap3Q99LM2 AC153881.1-201ENSMUST00000214448 284 ntBASIC17.16■□□□□ 0.34
Cdk5rap3Q99LM2 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC17.16■□□□□ 0.34
Cdk5rap3Q99LM2 AC069562.2-201ENSMUST00000224644 2146 ntBASIC17.16■□□□□ 0.34
Cdk5rap3Q99LM2 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Cdk5rap3Q99LM2 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cdk5rap3Q99LM2 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Cdk5rap3Q99LM2 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Cdk5rap3Q99LM2 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
Cdk5rap3Q99LM2 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cdk5rap3Q99LM2 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cdk5rap3Q99LM2 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cdk5rap3Q99LM2 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cdk5rap3Q99LM2 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC17.16■□□□□ 0.34
Cdk5rap3Q99LM2 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cdk5rap3Q99LM2 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cdk5rap3Q99LM2 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cdk5rap3Q99LM2 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdk5rap3Q99LM2 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cdk5rap3Q99LM2 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdk5rap3Q99LM2 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdk5rap3Q99LM2 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC17.15■□□□□ 0.34
Cdk5rap3Q99LM2 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdk5rap3Q99LM2 Gm13168-201ENSMUST00000121771 632 ntBASIC17.15■□□□□ 0.34
Cdk5rap3Q99LM2 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC17.15■□□□□ 0.34
Cdk5rap3Q99LM2 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Cdk5rap3Q99LM2 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Cdk5rap3Q99LM2 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cdk5rap3Q99LM2 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
Cdk5rap3Q99LM2 AC154649.1-201ENSMUST00000227392 384 ntBASIC17.15■□□□□ 0.34
Cdk5rap3Q99LM2 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdk5rap3Q99LM2 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC17.15■□□□□ 0.34
Cdk5rap3Q99LM2 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Cdk5rap3Q99LM2 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Cdk5rap3Q99LM2 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Cdk5rap3Q99LM2 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdk5rap3Q99LM2 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdk5rap3Q99LM2 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdk5rap3Q99LM2 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdk5rap3Q99LM2 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
Cdk5rap3Q99LM2 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Cdk5rap3Q99LM2 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC17.14■□□□□ 0.34
Cdk5rap3Q99LM2 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
Cdk5rap3Q99LM2 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cdk5rap3Q99LM2 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cdk5rap3Q99LM2 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cdk5rap3Q99LM2 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cdk5rap3Q99LM2 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC17.14■□□□□ 0.33
Cdk5rap3Q99LM2 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cdk5rap3Q99LM2 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC17.14■□□□□ 0.33
Cdk5rap3Q99LM2 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC17.14■□□□□ 0.33
Cdk5rap3Q99LM2 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC17.14■□□□□ 0.33
Cdk5rap3Q99LM2 AC156016.1-201ENSMUST00000227190 1035 ntBASIC17.14■□□□□ 0.33
Cdk5rap3Q99LM2 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cdk5rap3Q99LM2 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Cdk5rap3Q99LM2 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cdk5rap3Q99LM2 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cdk5rap3Q99LM2 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cdk5rap3Q99LM2 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Cdk5rap3Q99LM2 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cdk5rap3Q99LM2 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cdk5rap3Q99LM2 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cdk5rap3Q99LM2 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cdk5rap3Q99LM2 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cdk5rap3Q99LM2 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cdk5rap3Q99LM2 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cdk5rap3Q99LM2 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cdk5rap3Q99LM2 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Cdk5rap3Q99LM2 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cdk5rap3Q99LM2 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC17.13■□□□□ 0.33
Cdk5rap3Q99LM2 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdk5rap3Q99LM2 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdk5rap3Q99LM2 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdk5rap3Q99LM2 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdk5rap3Q99LM2 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cdk5rap3Q99LM2 Gm12669-201ENSMUST00000122162 1009 ntBASIC17.13■□□□□ 0.33
Cdk5rap3Q99LM2 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdk5rap3Q99LM2 Gm29257-201ENSMUST00000186115 639 ntBASIC17.13■□□□□ 0.33
Cdk5rap3Q99LM2 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Cdk5rap3Q99LM2 Otx2os1-204ENSMUST00000227221 751 ntBASIC17.13■□□□□ 0.33
Cdk5rap3Q99LM2 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cdk5rap3Q99LM2 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdk5rap3Q99LM2 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdk5rap3Q99LM2 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cdk5rap3Q99LM2 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdk5rap3Q99LM2 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC17.13■□□□□ 0.33
Cdk5rap3Q99LM2 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdk5rap3Q99LM2 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdk5rap3Q99LM2 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdk5rap3Q99LM2 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdk5rap3Q99LM2 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdk5rap3Q99LM2 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdk5rap3Q99LM2 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdk5rap3Q99LM2 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdk5rap3Q99LM2 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cdk5rap3Q99LM2 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdk5rap3Q99LM2 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdk5rap3Q99LM2 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Cdk5rap3Q99LM2 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdk5rap3Q99LM2 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms