Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC17.44■□□□□ 0.38
Clp1Q99LI9 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Clp1Q99LI9 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Clp1Q99LI9 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Clp1Q99LI9 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Clp1Q99LI9 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Clp1Q99LI9 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Clp1Q99LI9 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Clp1Q99LI9 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Clp1Q99LI9 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Clp1Q99LI9 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC17.43■□□□□ 0.38
Clp1Q99LI9 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Clp1Q99LI9 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.43■□□□□ 0.38
Clp1Q99LI9 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC17.43■□□□□ 0.38
Clp1Q99LI9 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.43■□□□□ 0.38
Clp1Q99LI9 Gm14494-201ENSMUST00000118786 435 ntBASIC17.43■□□□□ 0.38
Clp1Q99LI9 Gm12260-201ENSMUST00000122447 411 ntBASIC17.43■□□□□ 0.38
Clp1Q99LI9 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC17.43■□□□□ 0.38
Clp1Q99LI9 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.43■□□□□ 0.38
Clp1Q99LI9 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Clp1Q99LI9 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Clp1Q99LI9 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Clp1Q99LI9 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Clp1Q99LI9 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Clp1Q99LI9 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Clp1Q99LI9 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Clp1Q99LI9 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Clp1Q99LI9 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Clp1Q99LI9 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Clp1Q99LI9 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Clp1Q99LI9 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Clp1Q99LI9 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Clp1Q99LI9 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Clp1Q99LI9 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Clp1Q99LI9 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Clp1Q99LI9 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Clp1Q99LI9 Gm8097-201ENSMUST00000117903 829 ntBASIC17.42■□□□□ 0.38
Clp1Q99LI9 Gm4459-201ENSMUST00000118750 468 ntBASIC17.42■□□□□ 0.38
Clp1Q99LI9 Gm9727-201ENSMUST00000161387 555 ntBASIC17.42■□□□□ 0.38
Clp1Q99LI9 Gm8349-201ENSMUST00000182720 1003 ntBASIC17.42■□□□□ 0.38
Clp1Q99LI9 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Clp1Q99LI9 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC17.42■□□□□ 0.38
Clp1Q99LI9 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Clp1Q99LI9 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Clp1Q99LI9 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Clp1Q99LI9 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Clp1Q99LI9 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Clp1Q99LI9 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC17.41■□□□□ 0.38
Clp1Q99LI9 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Clp1Q99LI9 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.41■□□□□ 0.38
Clp1Q99LI9 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Clp1Q99LI9 Gm23935-201ENSMUST00000102303 57 ntBASIC17.41■□□□□ 0.38
Clp1Q99LI9 Gm24270-201ENSMUST00000102326 57 ntBASIC17.41■□□□□ 0.38
Clp1Q99LI9 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC17.41■□□□□ 0.38
Clp1Q99LI9 Gm13036-201ENSMUST00000117799 748 ntBASIC17.41■□□□□ 0.38
Clp1Q99LI9 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Clp1Q99LI9 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Clp1Q99LI9 Gm24245-201ENSMUST00000157318 57 ntBASIC17.41■□□□□ 0.38
Clp1Q99LI9 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC17.41■□□□□ 0.38
Clp1Q99LI9 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC17.41■□□□□ 0.38
Clp1Q99LI9 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Clp1Q99LI9 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
Clp1Q99LI9 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.41■□□□□ 0.38
Clp1Q99LI9 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Clp1Q99LI9 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Clp1Q99LI9 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Clp1Q99LI9 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Clp1Q99LI9 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Clp1Q99LI9 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Clp1Q99LI9 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Clp1Q99LI9 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Clp1Q99LI9 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC17.4■□□□□ 0.38
Clp1Q99LI9 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Clp1Q99LI9 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Clp1Q99LI9 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clp1Q99LI9 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clp1Q99LI9 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Clp1Q99LI9 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Clp1Q99LI9 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clp1Q99LI9 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clp1Q99LI9 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Clp1Q99LI9 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC17.4■□□□□ 0.38
Clp1Q99LI9 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC17.4■□□□□ 0.38
Clp1Q99LI9 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC17.4■□□□□ 0.38
Clp1Q99LI9 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Clp1Q99LI9 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
Clp1Q99LI9 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC17.4■□□□□ 0.38
Clp1Q99LI9 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Clp1Q99LI9 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC17.4■□□□□ 0.38
Clp1Q99LI9 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.4■□□□□ 0.38
Clp1Q99LI9 AC131586.3-201ENSMUST00000228355 1367 ntBASIC17.4■□□□□ 0.38
Clp1Q99LI9 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Clp1Q99LI9 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
Clp1Q99LI9 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Clp1Q99LI9 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Clp1Q99LI9 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
Clp1Q99LI9 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Clp1Q99LI9 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Clp1Q99LI9 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC17.39■□□□□ 0.37
Clp1Q99LI9 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms