Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cdk9Q99J95 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cdk9Q99J95 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Cdk9Q99J95 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cdk9Q99J95 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cdk9Q99J95 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cdk9Q99J95 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Cdk9Q99J95 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cdk9Q99J95 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cdk9Q99J95 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Cdk9Q99J95 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cdk9Q99J95 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cdk9Q99J95 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Cdk9Q99J95 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cdk9Q99J95 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cdk9Q99J95 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Cdk9Q99J95 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cdk9Q99J95 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Cdk9Q99J95 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Cdk9Q99J95 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cdk9Q99J95 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Cdk9Q99J95 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Cdk9Q99J95 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Cdk9Q99J95 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Cdk9Q99J95 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cdk9Q99J95 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC16.7■□□□□ 0.26
Cdk9Q99J95 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cdk9Q99J95 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cdk9Q99J95 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cdk9Q99J95 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cdk9Q99J95 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Cdk9Q99J95 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Cdk9Q99J95 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cdk9Q99J95 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cdk9Q99J95 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cdk9Q99J95 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cdk9Q99J95 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC16.7■□□□□ 0.26
Cdk9Q99J95 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Cdk9Q99J95 Gm6576-201ENSMUST00000169678 883 ntBASIC16.7■□□□□ 0.26
Cdk9Q99J95 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Cdk9Q99J95 Gm44672-201ENSMUST00000206944 1098 ntBASIC16.7■□□□□ 0.26
Cdk9Q99J95 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cdk9Q99J95 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC16.7■□□□□ 0.26
Cdk9Q99J95 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cdk9Q99J95 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
Cdk9Q99J95 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Cdk9Q99J95 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cdk9Q99J95 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Cdk9Q99J95 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cdk9Q99J95 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Cdk9Q99J95 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cdk9Q99J95 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cdk9Q99J95 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
Cdk9Q99J95 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cdk9Q99J95 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cdk9Q99J95 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC16.69■□□□□ 0.26
Cdk9Q99J95 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC16.69■□□□□ 0.26
Cdk9Q99J95 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Cdk9Q99J95 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC16.69■□□□□ 0.26
Cdk9Q99J95 Gm10138-203ENSMUST00000206952 366 ntBASIC16.69■□□□□ 0.26
Cdk9Q99J95 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cdk9Q99J95 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC16.69■□□□□ 0.26
Cdk9Q99J95 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Cdk9Q99J95 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cdk9Q99J95 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cdk9Q99J95 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Cdk9Q99J95 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cdk9Q99J95 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
Cdk9Q99J95 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Cdk9Q99J95 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC16.69■□□□□ 0.26
Cdk9Q99J95 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cdk9Q99J95 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cdk9Q99J95 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cdk9Q99J95 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cdk9Q99J95 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cdk9Q99J95 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Cdk9Q99J95 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Cdk9Q99J95 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cdk9Q99J95 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cdk9Q99J95 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cdk9Q99J95 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cdk9Q99J95 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cdk9Q99J95 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Cdk9Q99J95 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC16.68■□□□□ 0.26
Cdk9Q99J95 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Cdk9Q99J95 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC16.68■□□□□ 0.26
Cdk9Q99J95 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC16.68■□□□□ 0.26
Cdk9Q99J95 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Cdk9Q99J95 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Cdk9Q99J95 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
Cdk9Q99J95 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cdk9Q99J95 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Cdk9Q99J95 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cdk9Q99J95 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Cdk9Q99J95 Gm43072-201ENSMUST00000200283 1671 ntBASIC16.68■□□□□ 0.26
Cdk9Q99J95 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
Cdk9Q99J95 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cdk9Q99J95 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cdk9Q99J95 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Cdk9Q99J95 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 89.2 ms