Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
Rfc4Q99J62 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Rfc4Q99J62 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Rfc4Q99J62 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
Rfc4Q99J62 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC19.03■□□□□ 0.64
Rfc4Q99J62 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Rfc4Q99J62 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Rfc4Q99J62 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Rfc4Q99J62 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Rfc4Q99J62 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Rfc4Q99J62 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rfc4Q99J62 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC19.03■□□□□ 0.64
Rfc4Q99J62 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rfc4Q99J62 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rfc4Q99J62 Gfra2-202ENSMUST00000227633 1480 ntBASIC19.03■□□□□ 0.64
Rfc4Q99J62 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rfc4Q99J62 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rfc4Q99J62 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Rfc4Q99J62 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rfc4Q99J62 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Rfc4Q99J62 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rfc4Q99J62 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rfc4Q99J62 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rfc4Q99J62 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rfc4Q99J62 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC19.02■□□□□ 0.64
Rfc4Q99J62 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rfc4Q99J62 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Rfc4Q99J62 Gm5364-201ENSMUST00000216789 889 ntBASIC19.02■□□□□ 0.64
Rfc4Q99J62 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Rfc4Q99J62 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rfc4Q99J62 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rfc4Q99J62 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Rfc4Q99J62 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Rfc4Q99J62 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Rfc4Q99J62 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.63
Rfc4Q99J62 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Rfc4Q99J62 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rfc4Q99J62 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Rfc4Q99J62 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC19.01■□□□□ 0.63
Rfc4Q99J62 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rfc4Q99J62 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rfc4Q99J62 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rfc4Q99J62 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rfc4Q99J62 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rfc4Q99J62 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Rfc4Q99J62 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Rfc4Q99J62 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rfc4Q99J62 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rfc4Q99J62 Gm11594-201ENSMUST00000122313 162 ntBASIC19.01■□□□□ 0.63
Rfc4Q99J62 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC19.01■□□□□ 0.63
Rfc4Q99J62 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC19.01■□□□□ 0.63
Rfc4Q99J62 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rfc4Q99J62 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC19.01■□□□□ 0.63
Rfc4Q99J62 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
Rfc4Q99J62 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Rfc4Q99J62 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC19.01■□□□□ 0.63
Rfc4Q99J62 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rfc4Q99J62 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rfc4Q99J62 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rfc4Q99J62 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Rfc4Q99J62 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rfc4Q99J62 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC19.01■□□□□ 0.63
Rfc4Q99J62 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rfc4Q99J62 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rfc4Q99J62 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rfc4Q99J62 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rfc4Q99J62 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Rfc4Q99J62 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC19■□□□□ 0.63
Rfc4Q99J62 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Rfc4Q99J62 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
Rfc4Q99J62 Gm2213-201ENSMUST00000197485 688 ntBASIC19■□□□□ 0.63
Rfc4Q99J62 Rbfox2-207ENSMUST00000227533 1041 ntBASIC19■□□□□ 0.63
Rfc4Q99J62 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rfc4Q99J62 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Rfc4Q99J62 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rfc4Q99J62 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rfc4Q99J62 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rfc4Q99J62 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC19■□□□□ 0.63
Rfc4Q99J62 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Rfc4Q99J62 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rfc4Q99J62 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rfc4Q99J62 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Rfc4Q99J62 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rfc4Q99J62 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rfc4Q99J62 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC18.99■□□□□ 0.63
Rfc4Q99J62 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Rfc4Q99J62 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rfc4Q99J62 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Rfc4Q99J62 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rfc4Q99J62 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rfc4Q99J62 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Rfc4Q99J62 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Rfc4Q99J62 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC18.99■□□□□ 0.63
Rfc4Q99J62 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rfc4Q99J62 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rfc4Q99J62 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Rfc4Q99J62 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rfc4Q99J62 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC18.98■□□□□ 0.63
Rfc4Q99J62 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Rfc4Q99J62 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms